| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_1115 |
|---|
| Symbol | |
|---|
| ID | 6177682 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia ambifaria MC40-6 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010551 |
|---|
| Strand | - |
|---|
| Start bp | 1229563 |
|---|
| End bp | 1230387 |
|---|
| Gene Length | 825 bp |
|---|
| Protein Length | 274 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 641680871 |
|---|
| Product | binding-protein-dependent transport systems inner membrane component |
|---|
| Protein accession | YP_001807822 |
|---|
| Protein GI | 172060170 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG0555] ABC-type sulfate transport system, permease component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 26 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 25 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCTCGATC TGACTTTCCC GCTGCGCTGG CGCGTTGCAC TCGTCGCGCC GGCGCTCGCG
GTGTTCGCCG CGTTCTGGCT GCTGCCGATG GCGGCGCTCG TGCACGTGTC CGCCGACGGC
GCGTTCTTCA CGCAGTACGC GACGCTGCTC GGCAATGCGC GCTACATGAA AAGCCTCGGC
GAAACGGTTG CGTTGTCGGC CGGCGTCACG CTCGCGACGC TCGCGTTGTC GACGATCTCG
GGCCTGCTGC TCGCGCGCCG CGAATTCGCA GGCAAGCGCG TGCTGCTCGC GCTGCTCACG
TTTCCGCTCG CGTTCCCGGG CGTCGTGGTC GGCTTCATGG TGATCATGCT CGCCGGGCGG
CAGGGGCTGG TCGGCATGCT GTCCGCGAAG CTGACCGGCG ACAAGTGGGT GTTCGCGTAT
TCGGTTGCCG GGCTGTTCGT CGGCTACCTG TACTTCTCGA TTCCGCGCGT GATCGTCACC
GTGATCGCGG CCGCGTCGAA GCTCGATGCA TCGCTCGAGG AAGCCGCGCG CTCGCTCGGC
GCGTCGCCGT GGTGCATCTT CGTCGACATC GTGCTGCCGG CGCTCGCACC GGGCCTGATC
GCGGCCGGCG CGATCTGCTT CGCGACCGCG ATGGGCGCGT TCGGCACCGC GTTTACGCTC
GCCACCGACC TGAACGTGCT GCCGATGACC ATCTACACCG AGTTCACGCT GAACGCGAAC
ATCGCGACGG CGGCCGGCCT GTCGATCGTG CTCGGCATCG TCACGTGGGC CGTGCTCGCG
CTCGCGCGCC GGTTCACCGG CCATACCGCC GCCGCCGCGG CCTGA
|
|---|
| Protein sequence | MLDLTFPLRW RVALVAPALA VFAAFWLLPM AALVHVSADG AFFTQYATLL GNARYMKSLG
ETVALSAGVT LATLALSTIS GLLLARREFA GKRVLLALLT FPLAFPGVVV GFMVIMLAGR
QGLVGMLSAK LTGDKWVFAY SVAGLFVGYL YFSIPRVIVT VIAAASKLDA SLEEAARSLG
ASPWCIFVDI VLPALAPGLI AAGAICFATA MGAFGTAFTL ATDLNVLPMT IYTEFTLNAN
IATAAGLSIV LGIVTWAVLA LARRFTGHTA AAAA
|
|---|
| |