| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_0780 |
|---|
| Symbol | |
|---|
| ID | 6178368 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia ambifaria MC40-6 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010551 |
|---|
| Strand | - |
|---|
| Start bp | 872908 |
|---|
| End bp | 874044 |
|---|
| Gene Length | 1137 bp |
|---|
| Protein Length | 378 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 641680528 |
|---|
| Product | glycosyl transferase group 1 |
|---|
| Protein accession | YP_001807492 |
|---|
| Protein GI | 172059840 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0438] Glycosyltransferase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 26 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 30 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCCGCTA CCTCCTCGCT GCGCATCGCG CTCGTCTGCA ACACGGCCTG GGCGATCTAT
ACGTACCGCC ACGGACTGAT CCGTGCGCTC GTCGCGCGCG GCGCCGAGGT CGTCGTGATC
GCGCCGCACG ACCGCACGGT GCCGCTGCTC GAGCAGATGG GCTGCCGCTA CGTCGCGCTC
GCCGTCGCGT CGAAAGGCAC GAGCCCGCGC GAGGATCTCG GCACGCTCGC CGCGCTGGTG
CGCCATTACC GCGCGCTGCG GCCCGCGCTC GTGTTTCATT ACACGATCAA GCCGAACATC
TACGGATCGG TCGCCGCGTG GCTCGCGCGC GTGCCGTCGA TCGCGGTCAC CACGGGCCTC
GGCTACGTGT TCATCCAGAA AAGCCGCGCG GCGAGCGTCG CGAAACGCCT GTACCGGTTC
GCGTTCCGCT TCCCGCGCGA AGTCTGGTTC CTGAACCGCG ACGATCTCGC GACCTTCACG
GACGAGCGGC TGCTCGCGCA CCCGGACCGC GCGCGGCTGC TGCACGGCGA AGGCGTCGAT
CTCGACCAGT TCGCGCCGGT GCCGCTGCCC GGCGGCCTCG GCCCGGTGTT CATCCTGATC
GGCCGGCTGC TGTGGGACAA GGGCGTGCGC GAGTATGTCG AGGCCGCGCG CGTGGTGCGT
GCCCGCTACC CGGACGCGCG CTTCCAGCTG CTCGGGCCGC TCGGTGTCGA CAACCCGAGC
GCGATCAGCC GCGCGGACGT CGACGCATGG GTTAGCGAAG GCGTCGTCGA GTATCTCGGC
GAGGCGCACG ACGTGCGCCC GCACATCGCG GCGGCCGACT GCGTCGTGCT GCCGTCGTAC
CGCGAAGGCG TGCCGCGCAC GCTGATGGAA GCGTCCGCGA TGGGCCGCCC GATCGTCGCG
ACCGACGTGC CGGGCTGCCG CGACGTGGTC GGCGACGGGG AAACCGGCTT CCTGTGCCGC
GTACGCGACA GCGCGAGCCT CGCGGAGCAG TTGGTCCGCA TGATCGAACT CGGGCGCGCC
GGACGCGACG CGATGGGCGC GCGCGGCCGC CGCAAGGTGG CCGAGGAATT CGACGAGCAG
CAGGTCGTCG AACGTTACCG GCAGACCATT CATACATTGA CCGGCATCAC ACTCTGA
|
|---|
| Protein sequence | MSATSSLRIA LVCNTAWAIY TYRHGLIRAL VARGAEVVVI APHDRTVPLL EQMGCRYVAL
AVASKGTSPR EDLGTLAALV RHYRALRPAL VFHYTIKPNI YGSVAAWLAR VPSIAVTTGL
GYVFIQKSRA ASVAKRLYRF AFRFPREVWF LNRDDLATFT DERLLAHPDR ARLLHGEGVD
LDQFAPVPLP GGLGPVFILI GRLLWDKGVR EYVEAARVVR ARYPDARFQL LGPLGVDNPS
AISRADVDAW VSEGVVEYLG EAHDVRPHIA AADCVVLPSY REGVPRTLME ASAMGRPIVA
TDVPGCRDVV GDGETGFLCR VRDSASLAEQ LVRMIELGRA GRDAMGARGR RKVAEEFDEQ
QVVERYRQTI HTLTGITL
|
|---|
| |