Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BamMC406_0754 |
Symbol | |
ID | 6178713 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia ambifaria MC40-6 |
Kingdom | Bacteria |
Replicon accession | NC_010551 |
Strand | + |
Start bp | 840888 |
End bp | 841466 |
Gene Length | 579 bp |
Protein Length | 192 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 641680502 |
Product | hypothetical protein |
Protein accession | YP_001807466 |
Protein GI | 172059814 |
COG category | [K] Transcription |
COG ID | [COG1678] Putative transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 0.173115 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 0.270249 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCAAAGC CTTCCGATCG CATCAATCTC ACCAACCAGT TCCTGATTGC CATGCCCAAC ATGGCCGATC CGACGTTTTC AGGAACGGTG GTCTATCTTT GCGATCACAG CGAGCGCGGA GCGCTCGGCC TCGTCATCAA TCGTCCCACC GACATCGACC TCGAATCGCT GTTCAACCGC ATCGACCTGA AGCTCGACAT CGAGCCGCTG CTGCACATTC CCGTGTACTT CGGCGGCCCG GTGCAGACCG AGCGCGGCTT CGTGCTGCAC GAGCCGGTCG AGGGCGCGAA CTACAACTCG TCCATGTCGG TCGAGGGCGG GCTCGAGATG ACGACGTCGA AGGACGTGCT CGAGGCGGTC GCGACGGGCA CCGGCCCGAA GCGTTTCCTG CTGACGCTCG GCCATGCAGG CTGGGGCGCC GGGCAGCTCG AGGAAGAAAT TTCCCGCAAC GGCTGGCTGA CGGTCGCCGC CGATCCGCGC ATCGTGTTCG ACACGCCGGC CGAGGAGCGT TTCGAAGCCG CGCTCGGCCT GCTCGGCGTC AGCTCGTCGA TGCTGTCCGG CGAAGCAGGG CACGCATGA
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Protein sequence | MSKPSDRINL TNQFLIAMPN MADPTFSGTV VYLCDHSERG ALGLVINRPT DIDLESLFNR IDLKLDIEPL LHIPVYFGGP VQTERGFVLH EPVEGANYNS SMSVEGGLEM TTSKDVLEAV ATGTGPKRFL LTLGHAGWGA GQLEEEISRN GWLTVAADPR IVFDTPAEER FEAALGLLGV SSSMLSGEAG HA
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