| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_0683 |
|---|
| Symbol | |
|---|
| ID | 6178029 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia ambifaria MC40-6 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010551 |
|---|
| Strand | + |
|---|
| Start bp | 770543 |
|---|
| End bp | 771178 |
|---|
| Gene Length | 636 bp |
|---|
| Protein Length | 211 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 641680430 |
|---|
| Product | TetR family transcriptional regulator |
|---|
| Protein accession | YP_001807395 |
|---|
| Protein GI | 172059743 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 29 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 34 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAGGACA CGGGTGCGCG GCTCACGCGC GACACGGTGA TGCGCGCGGC GCTCGATCTG
CTGAACGAGG TCGGTATCGA CGGGCTGTCG ACGCGGCGGC TCGCGGAGCG GCTCGGCGTG
CAGTCGCCCA CGCTGTACTG GCACTTCCGC AACAAGGCCG AACTGCTCGA CGCGATGGCC
GAGGCGATCA TGCTCGAGCG CCACGGCGCA TCGCTGCCGC GGCCGGGCGA CGCATGGGAT
GCGTGGCTTC TCGAGAATGC GCGCAGTTTC CGTCGCGCGC TGCTCGCCTA TCGCGACGGC
GCGCGCCTGC ATGCCGGTAC GCGGCCGCGC ACGCTGCATT TCGGTTCGAT CGAACGAAAG
GTGGCGCTGC TGGCCGAGGC GGGTTTCGCG CCGGACGAAG CGGTCGACGT GATGTATGCG
CTCGGCCGCT TCGTGGTCGG TTGGGTGCTG GAAGAGCAGG CGGAAGCGGA ACGCGAAACC
GACACGACGC TGCCTGACAC GGCCGAGCAT CCGCTCCTCG CGCAGGGCTG GGCTGCGCTG
CGCGAACGTG GCGGCGACGA AGCGTTCGAG CGTGGCGTTG CGTTGATCGT CGATGGCGCG
CGCGCGCGTC TGGCGGCGCG CCGGCGCGGC GGTTGA
|
|---|
| Protein sequence | MKDTGARLTR DTVMRAALDL LNEVGIDGLS TRRLAERLGV QSPTLYWHFR NKAELLDAMA
EAIMLERHGA SLPRPGDAWD AWLLENARSF RRALLAYRDG ARLHAGTRPR TLHFGSIERK
VALLAEAGFA PDEAVDVMYA LGRFVVGWVL EEQAEAERET DTTLPDTAEH PLLAQGWAAL
RERGGDEAFE RGVALIVDGA RARLAARRRG G
|
|---|
| |