| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_0585 |
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| Symbol | |
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| ID | 6178018 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria MC40-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010551 |
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| Strand | - |
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| Start bp | 657121 |
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| End bp | 657768 |
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| Gene Length | 648 bp |
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| Protein Length | 215 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 641680333 |
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| Product | TetR family transcriptional regulator |
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| Protein accession | YP_001807298 |
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| Protein GI | 172059646 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 0.808799 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 0.581317 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAAAGACA AACCCGCCCA AGGTCCGCGC GGCCTCGACA AGGACGCGAT CGTCGCGGCC
GCGCTCGCGC TGCTCGAAGA GGTCGGCGAA GCCGCGTTCA GCGTGCGCAA GCTCGCGCAG
TCGGTCGGTT GCGACCCGAT GAGCGTGCTG TATCACTTCA AGTCGAAGGA CGGCCTGACC
CGTGCGATCG CGAATGCGCT GTCGCGCTCG CTGGTACCGG TCGACGACAC GCTGCCGTGG
CGCGACCGCC TGCGCGATCT CGCGCGCCAG TACCGCGCGC TCGCGCTGCG CTACCCGGCC
GCGTTCGCGC TGCTGCAGCG GCATATGAGC ACGGGGCCGG CCGATCTCGC GCACATCGAG
GCCGTGCATC GCGCGCTGGC CGACGCGGGC ATCGCGCGCA CCGCACTGCC GGCCGTGTGC
GTCGGCTGGT ATGCGAGCGT GATCGGGCTC GCCGCCGCCG AGGCCGGCGG CCTCACGCGG
CCCGCGAACG ACGTCGAGCT CGCGGAAATG GATGCGCTGT CCGATACCGC GCATCCGCTC
GTCAAATCGG CCGCGCCGCT CTATGCGCGG CTCGATCCGG CCGTGGTGCA TGACACGATG
CTCGACGTGC TGCTCGACGG CATCGCGCGG TATGCACACG CAGCCTGA
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| Protein sequence | MKDKPAQGPR GLDKDAIVAA ALALLEEVGE AAFSVRKLAQ SVGCDPMSVL YHFKSKDGLT
RAIANALSRS LVPVDDTLPW RDRLRDLARQ YRALALRYPA AFALLQRHMS TGPADLAHIE
AVHRALADAG IARTALPAVC VGWYASVIGL AAAEAGGLTR PANDVELAEM DALSDTAHPL
VKSAAPLYAR LDPAVVHDTM LDVLLDGIAR YAHAA
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