| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_0152 |
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| Symbol | |
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| ID | 6177436 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria MC40-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010551 |
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| Strand | - |
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| Start bp | 178749 |
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| End bp | 180200 |
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| Gene Length | 1452 bp |
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| Protein Length | 483 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 641679887 |
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| Product | putative transcriptional regulator |
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| Protein accession | YP_001806869 |
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| Protein GI | 172059217 |
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| COG category | [K] Transcription |
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| COG ID | [COG2865] Predicted transcriptional regulator containing an HTH domain and an uncharacterized domain shared with the mammalian protein Schlafen |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 26 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAATCTTG AGCGTGACAT TGCACTTGTC GACGAGCTGC GTTCGCACAC TAGCGAGTGC
CAGTGGCTTG AATTCAAGAA AAACAACACC GACCACGAGA TGATCGGCAA ACGGTGCTCG
GCGCTGTCCA ACGCCGCGCG CATTGAAGGC AGAGATACCG CGTATATGCT CTGGGGTATC
GAGGATGAAA CCCATAATGT AGTGGGCACA TCTTTCGATC CGGAGTCTCA AAAAGTCGGC
GGAGTGGTGC TCCAATTGTG GCTAGCAAAC GCGTTGCAGC CGAGCATTAC TTTCAGTTTC
CGGACGATTG CTCACCCCGA GGGGTGCGTG GTTCTGTTGG AAATTCCGGC CGCTACGGGA
ACCCCCGTCA GCTACAATGG TATCCCCTAC GTGCGCATCG GAAGCGCAAC ACCCAAGCTC
ACGGAGTATC CCGAGCGCTA CCAGAAGCTC CTCGAGCGGA TGCAACCGTA TCGATGGGAG
CATGGCGTCG CAGCGCAGTA CATTAAGGGC GACGATGTGT TGGAATTGCT CGACTACAGC
CATTACTTTC GGCTTACGAA GCAACCGCTT CCCGACAACC GAAGCGGGAT ATTCGAGAAG
CTGGCAGCGG ACCGGTTGAT AGCTCGCGAT GTCAGCGACC GGTGGAACAT CACGAACCTC
GGTGCAGTGC TGTTTGCCAG TCGGCTCAGT GATTTTGATG CTGGTTTGGC ACGGAAAGCT
GTTCGCTTCG TCGCCTATGA AGGGAAGAAC CGCGCTGCAA CGGTCACGCA TCGCTTGGAC
GGAGAGAAGG GCTACGCCGT CGGGTTCGAA GGCCTCGTCA GTTTTCTGAA CGAGCTGTTG
CCGAAGAAGG AGCATATTGG TGCGCTCCGC GAAGCAGCCA TTGTGTTCCC GGAGCTAGCG
ATACGTGAGT TGGTCGCGAA CGCTTTAATT CACCAGGACA TGACGCTTAC TGGTGCAGGG
CCGCTGATCG AATTGTTTGA GGATCGAATC GAGATCAGTA ATCCTGGCGA ACCGCTGGTG
AAGCCAGAGC GCATGATTGA TTTGCCCCCG CGCTCGCGAA ATGAAGCCCT CGCCTCGCTG
ATGCGCCGGA TGGGGATGTG TGAGGAACAG GGTAGTGGTC TCGACAAGGT GCTGCAGCTC
GTTGAGGTAT CGCAATTGCC GCCGCCGCTT TTTCGCTCGG AGCAAAACAC CACCCTGGTC
ACACTCTACG CTCCGCGCAG CTTCGCCGAG ATGACGCCCG ACGAGCGTGT GCGTGCGTGC
TATTTCCACG CAGTTCTCCG CTTCTTGAGC GGCGACAAGA TGAAAAACTC GACGTTGTGC
GAGCGCCTGG GGATCGCCAC GAAAAATGCC GCGCAAGCGT CAGCGGTTAT AGCCAAAACG
TTGGAGGCTG GCCTGATCCG AGTCGCGGAT CCAGAACACC CCCGAGCAGG CTATCTACCT
CACTGGGCGT GA
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| Protein sequence | MNLERDIALV DELRSHTSEC QWLEFKKNNT DHEMIGKRCS ALSNAARIEG RDTAYMLWGI
EDETHNVVGT SFDPESQKVG GVVLQLWLAN ALQPSITFSF RTIAHPEGCV VLLEIPAATG
TPVSYNGIPY VRIGSATPKL TEYPERYQKL LERMQPYRWE HGVAAQYIKG DDVLELLDYS
HYFRLTKQPL PDNRSGIFEK LAADRLIARD VSDRWNITNL GAVLFASRLS DFDAGLARKA
VRFVAYEGKN RAATVTHRLD GEKGYAVGFE GLVSFLNELL PKKEHIGALR EAAIVFPELA
IRELVANALI HQDMTLTGAG PLIELFEDRI EISNPGEPLV KPERMIDLPP RSRNEALASL
MRRMGMCEEQ GSGLDKVLQL VEVSQLPPPL FRSEQNTTLV TLYAPRSFAE MTPDERVRAC
YFHAVLRFLS GDKMKNSTLC ERLGIATKNA AQASAVIAKT LEAGLIRVAD PEHPRAGYLP
HWA
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