Gene BamMC406_0129 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamMC406_0129 
Symbol 
ID6177265 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria MC40-6 
KingdomBacteria 
Replicon accessionNC_010551 
Strand
Start bp150879 
End bp152276 
Gene Length1398 bp 
Protein Length465 aa 
Translation table11 
GC content69% 
IMG OID641679864 
Productethanolamine ammonia lyase large subunit 
Protein accessionYP_001806847 
Protein GI172059195 
COG category[E] Amino acid transport and metabolism 
COG ID[COG4303] Ethanolamine ammonia-lyase, large subunit 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCTACA CGGAGACGAT CGGCCCGCGC ACGTACCGCT TCGCGGACCT GAAGACGCTG 
CTCGCGAAAG CGAGCCCGTT GCGCTCCGGC GACCAGCTCG CCGGCGTCGC GGCGGCGAGC
GAGGAGGAGC GCGTCGCCGC GAAGATCGCG CTCGCGGGCG TGCCGCTGAA GGCATTCCTG
AACGAGGCGC TGATTGCGTA CGAATACGAC GAGGTCACGC GCCTGATCCT CGACGATCAC
GACGCGGCCG CGTTCGCGGA AATCTCGCAC CTGACGGTCG GCGATTTCCG CAACTGGCTG
CTGTCGCCCG TGGCCGACGG CGCCGCGCTC GAGCGGATCG CGCCGGGCCT CACGCCGGAG
ATGGTCGCGG CCGTGTCGAA GCTGATGCGC AACCAGGACC TGATCGCGGC CGCGCGGAAG
CGCCGCGTGG TCACGCGCTT TCGCAACACG GTCGGGCTGG CCGGCCGGAT GTCGGTGCGG
CTGCAGCCGA ACCACCCGAC CGACGACGTG AAGGGCATCG CCGCGTCGAT GCTCGACGGG
CTGATGTACG GCTGCGGCGA CGCGATGATC GGCATCAACC CGGCGACCGA CAGCCTCGCG
GCGATCGTGA AGCTGCTCGC GATGATCGAC GGGTTCCGCG AACGCTACGG CGTGCCGACG
CAGTCGTGTG TACTCACTCA CGTGACGAAC ACGATCGCCG CGATCGAGAA GGGCGCGCCG
GTCGACTTGG TGTTCCAGTC GATCGCGGGC ACCGAGAAGG CGAACGCGAG CTTCGGCATC
TCGCTCGCGC TGCTCGGCGA GGCGCGCGAG GCCGCGTTGT CGCTCGGGCG CGGCACCGTC
GGCAACAACC TGATGTATTT CGAGACGGGC CAGGGCAGCG CGCTGTCGGC GAACGCGCAC
TTCGGCGTCG ATCAGCAGAC CTGCGAGGTG CGCGCGTACG CGGTCGCCCG CAAGTTCGAT
CCGTTCCTCG TGAACACGGT GGTCGGCTTC ATCGGGCCCG AATACCTGTA CGACGGCAAG
CAGATCATCC GCGCGGGGCT CGAGGATCAC TTCTGCGGCA AGCTGCTCGG CGTGCCGATG
GGCTGCGACA TCTGCTACAC GAACCACGCG GAAGCCGACC AGGACGACAT GGACACGCTG
CTGACGCTGC TGGGCGCGGC CGGCATCAAC TTCATCATGG GGATTCCGGG CGCGGACGAC
GTGATGCTGA ACTACCAGAG CACGTCGTTT CACGACCAGC TGTACGTGCG CGAGGTGCTC
GGCCTGCGCC GCGCGCCCGA GTTCGAGGAG TGGCTGGAGA CGATGGAGAT CGCCGACGCG
CACGGCGCGC TGCGCGTGGC GAGCGCGCGC GTGCCGCTGC TCGCGGGCGC GAACGACTGG
ATGGGGATTT CCGCATGA
 
Protein sequence
MAYTETIGPR TYRFADLKTL LAKASPLRSG DQLAGVAAAS EEERVAAKIA LAGVPLKAFL 
NEALIAYEYD EVTRLILDDH DAAAFAEISH LTVGDFRNWL LSPVADGAAL ERIAPGLTPE
MVAAVSKLMR NQDLIAAARK RRVVTRFRNT VGLAGRMSVR LQPNHPTDDV KGIAASMLDG
LMYGCGDAMI GINPATDSLA AIVKLLAMID GFRERYGVPT QSCVLTHVTN TIAAIEKGAP
VDLVFQSIAG TEKANASFGI SLALLGEARE AALSLGRGTV GNNLMYFETG QGSALSANAH
FGVDQQTCEV RAYAVARKFD PFLVNTVVGF IGPEYLYDGK QIIRAGLEDH FCGKLLGVPM
GCDICYTNHA EADQDDMDTL LTLLGAAGIN FIMGIPGADD VMLNYQSTSF HDQLYVREVL
GLRRAPEFEE WLETMEIADA HGALRVASAR VPLLAGANDW MGISA