Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BamMC406_0099 |
Symbol | |
ID | 6176418 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia ambifaria MC40-6 |
Kingdom | Bacteria |
Replicon accession | NC_010551 |
Strand | + |
Start bp | 112020 |
End bp | 112547 |
Gene Length | 528 bp |
Protein Length | 175 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 641679834 |
Product | F0F1-type ATP synthase subunit I-like protein |
Protein accession | YP_001806817 |
Protein GI | 172059165 |
COG category | [C] Energy production and conversion |
COG ID | [COG3312] F0F1-type ATP synthase, subunit I |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.00813238 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | 25 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCGGGTC AGGCGCCGAA CGACAGGCAC GATGATCACC GAGCGCAACG CACCGCTTCA GCGGCCGGCG AACGGCGCGA GTCCGATGCC GACGACTGGG ATGCCGAGCA GCAAGATAAC AACATCGTTC CGCTCACGCG GACGGAAGCC GAGAGGCTGT TCGGTCCGAA CGTGAGCAAG CCATCGCGCG TGACCCCCTC CAAGGTGGTG GCCGCGCAGG TGGTCTTGTC CCTGGTTGCA ACGCTGGCGT GGTGGCTGTT TTCAAAGTCG CCGGGCGCCG CTGCGCAGTC CGCGTTTCTG GGCGGGGCGA TCGGCTGGGT GCCAAGCGCG TTGTTCGTGG CACGACTGAA GGCAGGTGGC TCGGCCACCG TCATGAGCTG GGTGATGGGC GAAGCCCTGA AGCTCGGCCT GACGATCGGG ATGTTCGCAG CAGTGGCGTT CGGCTGGGCC GGCGTGCACT GGGTGCCGTT CCTGGTCACG TACCTCGTCG TGCTGAAGAC GTACTGGATC GCGCTGGCCT GGCGGTAA
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Protein sequence | MAGQAPNDRH DDHRAQRTAS AAGERRESDA DDWDAEQQDN NIVPLTRTEA ERLFGPNVSK PSRVTPSKVV AAQVVLSLVA TLAWWLFSKS PGAAAQSAFL GGAIGWVPSA LFVARLKAGG SATVMSWVMG EALKLGLTIG MFAAVAFGWA GVHWVPFLVT YLVVLKTYWI ALAWR
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