| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnec_1754 |
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| Symbol | |
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| ID | 6183206 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polynucleobacter necessarius subsp. necessarius STIR1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010531 |
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| Strand | + |
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| Start bp | 1532178 |
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| End bp | 1533698 |
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| Gene Length | 1521 bp |
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| Protein Length | 506 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 641672255 |
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| Product | peptide chain release factor 3 |
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| Protein accession | YP_001798425 |
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| Protein GI | 171464312 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG4108] Peptide chain release factor RF-3 |
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| TIGRFAM ID | [TIGR00231] small GTP-binding protein domain
[TIGR00503] peptide chain release factor 3 |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 0.275542 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 76 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGCTCTACG CAGGCGCAAT TCAAATTGCA GGAAGTGTTA AAGCCCGAAA AGCAACGCGT
CATGCAATCT CTGACTGGAT GGAAATTGAA AAGCAGCGCG GCATCTCTGT AGCAAGCTCT
GTGATGCAGA TGGAATATCG CGATTGCATC ATTAACCTAT TAGATACTCC CGGGCACCAG
GATTTCTCCG AAGATACCTA CCGAGTATTG ACTGCAGTTG ACTCCGCTCT CATGGTAATC
GATGCCGCTA ACGGCGTTGA ATCACAAACA CTGCGCCTAC TCAAGGTTTG CCGTACACGC
AATACACCTA TCGTGACCTT CATCAATAAG ATGGACCGCG AAGTAAAGCC CCCAATGGAG
CTAATGGATG AAATCGAAAC CGCTCTTGGC ATTGAAGTAG TTCCATTTAC CTGGCCAGTT
GGTATGGGCA AATCTTTTGC TGGTGTGATT GATATTGCAA ACATGCGGAT GCGCATGTTT
AAAGCCGGCG AAGATCGTGT GACCGAAGAT TCTCATGCCG TAGTGGATGC GAATGATCCG
GCCCTGAAAG AACGACTAGG AACAGACTTA GAAAATGCTC TGGCTGAAGT AGAGCTCATT
AAAGAAGCGA TGCCTGCATT TGACCTCGAA GCTTTTCTAG CGGGGCATCA GTCGCCAGTC
TTCTTTGGCT CCGCAATCAA TAACTTCGGC GTTCGTGAGA TTCTCAACAC ACTAATTGAA
TTAGCGCCTT CACCAGGCTC ACGCAAGGCA TTGCAACGCG AAGTAAGTCC TGCAGAAAAT
AAATTCTCAG CAGTAGTCTT TAAGATTCAG GCCAATATGG ATCCAGCACA CCGAGATAGA
GTGGCCTTTT TAAGAATCTG TTCTGGCCAC TTTCAGCGCG GCATGAAACT CAAAATTTGT
CGTAATGGCA AAGAAGTGCG AACCAATAAT GCACTCTCCT TTTTATCGCA AAGACGCGAC
ATTTTGGACG AAGCTTTTCC TGGCGACATC ATTGGCCTTC CAAACCATAG CTTGCTACGC
CTAGGCGACA CCCTGACCGA AGGGGAGCAA TTACAATTTA CGGGCTTGCC ATTCTTTGCG
CCAGAAATAT TCCGAATGGT TGAATCTGCC GATCCATTGC GCTCAAAACA ATTGCGCACA
GGACTGATGC AGCTAGGTGA AGAAGGTGCC ATTCAGGTCT TTAGGCCTAT CGCTGGCGGC
ACCATGTTGT TAGGTGCATT CGGTCAGCTT CAATTTGAGG TGGTGAGTCA TCGCCTTCAG
ACGGAATACG GCGCTGAAGT ACGTCTATTG CCAGCACGCT ACAGCTTGGC CCGCTGGGTT
AGCTCAGAAG ATCCAATAGC GCTGAAAAAA TTCACCCAAG AAAATATCCA CCGCATGGCT
GAAGACGTCG TAGGTGCATC GGTCTTCTTA GCATCGCATA AATCAGAATT AGATGTAGCC
CAACAACGCT GGGAATCCAT TCAATTCCAT GCCCTAAGAG AGCATGCCGG CCTAATCTAT
CAATCTGATT TAGCAGGCTA A
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| Protein sequence | MLYAGAIQIA GSVKARKATR HAISDWMEIE KQRGISVASS VMQMEYRDCI INLLDTPGHQ
DFSEDTYRVL TAVDSALMVI DAANGVESQT LRLLKVCRTR NTPIVTFINK MDREVKPPME
LMDEIETALG IEVVPFTWPV GMGKSFAGVI DIANMRMRMF KAGEDRVTED SHAVVDANDP
ALKERLGTDL ENALAEVELI KEAMPAFDLE AFLAGHQSPV FFGSAINNFG VREILNTLIE
LAPSPGSRKA LQREVSPAEN KFSAVVFKIQ ANMDPAHRDR VAFLRICSGH FQRGMKLKIC
RNGKEVRTNN ALSFLSQRRD ILDEAFPGDI IGLPNHSLLR LGDTLTEGEQ LQFTGLPFFA
PEIFRMVESA DPLRSKQLRT GLMQLGEEGA IQVFRPIAGG TMLLGAFGQL QFEVVSHRLQ
TEYGAEVRLL PARYSLARWV SSEDPIALKK FTQENIHRMA EDVVGASVFL ASHKSELDVA
QQRWESIQFH ALREHAGLIY QSDLAG
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