Gene Pnec_1681 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnec_1681 
Symbol 
ID6183587 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolynucleobacter necessarius subsp. necessarius STIR1 
KingdomBacteria 
Replicon accessionNC_010531 
Strand
Start bp1469764 
End bp1470081 
Gene Length318 bp 
Protein Length105 aa 
Translation table11 
GC content47% 
IMG OID641672194 
Productprotein of unknown function DUF1365 
Protein accessionYP_001798364 
Protein GI171464251 
COG category[S] Function unknown 
COG ID[COG3496] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones47 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones74 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCTTCAA TCTGGATCTG CACTAGAGCA GACGGAAGAG TGCAAGCAGT GCTAGCTGAA 
GTGAATAACA CCTTTGGAGA ACGTCATTGC TACTTATTGC ATAAAGATTC TGGCGAAGAG
TTGCGCTCAG GCGAAACACT AACAAGCCAA AAGGTTTTTC ATGCTTCTCC ATTTTGTGGA
GTGCGCGGCG AATACCGTTT TCGCTTCTTG TTTCCAAAAG ATAGTGGTAG CGGTGAGAAC
AGCGTCTGCC GGATTGAGCT TCACGAAGAC GGCCTACCCT TATCAATACC AGCGTTAGCG
GTAACAGCCG CCTACTAA
 
Protein sequence
MSSIWICTRA DGRVQAVLAE VNNTFGERHC YLLHKDSGEE LRSGETLTSQ KVFHASPFCG 
VRGEYRFRFL FPKDSGSGEN SVCRIELHED GLPLSIPALA VTAAY