Gene Pnec_1677 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnec_1677 
Symbol 
ID6184583 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolynucleobacter necessarius subsp. necessarius STIR1 
KingdomBacteria 
Replicon accessionNC_010531 
Strand
Start bp1467520 
End bp1467975 
Gene Length456 bp 
Protein Length151 aa 
Translation table11 
GC content43% 
IMG OID641672192 
Productglutathione peroxidase 
Protein accessionYP_001798362 
Protein GI171464249 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0386] Glutathione peroxidase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones46 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones76 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTCCGCA ATCTAATGAA TTGGCTCTTT GGCTTATTTA TCCTCCTATC TGGACTTCAG 
CTTGCTTATG CTGCAAGCAA CTTGCAGGCC GCTCCTCTCC CACACCTTCC CCATCTGCAG
GATGAAGCAC CACAAAACCT TTGCCAATAT CAAGGCAAGG TCATTTTGGT TGTGAATACA
GCGAGCTTCT GCGGCTTTAC AAGTCAATAT GAGGGTCTTG AGAAGATTTA TACCAAATAC
AAAGATCAGG GTTTTGTGGT GCTCGGCTTT CCATCTAATG ATTTCGGGCA GCAAGAACCT
GGAAGCAATA AAGATATTGC TGATTTCTGC AAAAATACTT ACGAAGTGAA ATTTCCCATG
TTCGCCAAAA GCATGGTCTC AGGAAACAAT CCCAACCCTC TATTTAAGAT GCTGATTGCC
AAAACTGGCA CAACTCCAAA ATGGAACTTT TTATAA
 
Protein sequence
MLRNLMNWLF GLFILLSGLQ LAYAASNLQA APLPHLPHLQ DEAPQNLCQY QGKVILVVNT 
ASFCGFTSQY EGLEKIYTKY KDQGFVVLGF PSNDFGQQEP GSNKDIADFC KNTYEVKFPM
FAKSMVSGNN PNPLFKMLIA KTGTTPKWNF L