| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnec_1675 |
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| Symbol | |
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| ID | 6183928 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polynucleobacter necessarius subsp. necessarius STIR1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010531 |
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| Strand | + |
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| Start bp | 1466133 |
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| End bp | 1466942 |
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| Gene Length | 810 bp |
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| Protein Length | 269 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 641672190 |
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| Product | putative transcriptional acitvator, Baf family |
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| Protein accession | YP_001798360 |
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| Protein GI | 171464247 |
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| COG category | [K] Transcription |
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| COG ID | [COG1521] Putative transcriptional regulator, homolog of Bvg accessory factor |
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| TIGRFAM ID | [TIGR00671] pantothenate kinase, type III |
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Plasmid Coverage information |
| Num covering plasmid clones | 40 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 73 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCCTAT ATTTATTCTT TGATGTTGGT AATACACGCC TTAAATGGGC CGCTGTTGAA
TCTAATCAAA ATCCAAACGC TCAACAAAAG AAATTGTGGG CTTACTCAGG TTCCATTAGT
AGCAAGTCCC TGGACTCAGC AGAGCATCGT AATGAATTGG CAGACTATAT TTCTAAAACG
CTTCCCAAGC CTGCAGCCAT TGGATTTAGC TGCGTAGCTG GTGAAGAGGC GATCACCAAT
CTCAAATCAC TCTTTCCAAA ATGGAGTGAT TTGACTTGGA AGCAATTAAA AGGTGATAGC
ACCTATTCAG GGATGCGTAG CCTGTATCAA GACACCAGCA AACTTGGTGC CGACCGCTGG
GCCGCCCTCA TTGGGGCTCG CACCTTATCT ACCAACAACA CTTTAGTTGT GAATGCTGGC
ACCGCCACTA CCATTGACTT GCTCGGATCT AATGGCGTGC ACTATGGCGG ATGGATCCTA
CCTGGTCTTG GGCTGATGCA AGAAAGCTTA CAGAGTGAAG CTGCACAACT CCCATTAGCG
GTGCGCGGAG AATCTCAGCA AGAATTTGGA ACTACTACTA ATGAAGCCAT CATTGGCGGA
TGTGATGCCG CACAAATTGG CGCCATTCAC TACGCACTAC TTCAGACGAA AAAATTAAAT
CATCCAGTTG AAAGAATTTG GATTGATGGA GGCAATGCAA AAATTCTGCT TGATCAAATT
CAGAAATCTA GCCTACAGAA TTGGCCTATA GAGAAAACTG AGGGCTTGGT CCTGCGCGGC
ACTTGGGCGT GGTTACTACA AAACGTTTAA
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| Protein sequence | MSLYLFFDVG NTRLKWAAVE SNQNPNAQQK KLWAYSGSIS SKSLDSAEHR NELADYISKT
LPKPAAIGFS CVAGEEAITN LKSLFPKWSD LTWKQLKGDS TYSGMRSLYQ DTSKLGADRW
AALIGARTLS TNNTLVVNAG TATTIDLLGS NGVHYGGWIL PGLGLMQESL QSEAAQLPLA
VRGESQQEFG TTTNEAIIGG CDAAQIGAIH YALLQTKKLN HPVERIWIDG GNAKILLDQI
QKSSLQNWPI EKTEGLVLRG TWAWLLQNV
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