| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnec_1623 |
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| Symbol | |
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| ID | 6183214 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polynucleobacter necessarius subsp. necessarius STIR1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010531 |
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| Strand | + |
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| Start bp | 1425169 |
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| End bp | 1426656 |
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| Gene Length | 1488 bp |
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| Protein Length | 495 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 641672140 |
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| Product | outer membrane lipoprotein LolB |
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| Protein accession | YP_001798311 |
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| Protein GI | 171464198 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG3017] Outer membrane lipoprotein involved in outer membrane biogenesis |
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| TIGRFAM ID | [TIGR00548] outer membrane lipoprotein LolB |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 0.84859 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 68 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCAAAT TCTCACTGAA ACCTCTCTTG AAGGGTTTAT TCCTGGTGGC CCTGACTAGC
GGAATGATTT CGTACAGTCA TGCGCAGCCA CAGGCAAATG GATTGCAAAC AAGTGAAGCC
GTCTTTGAGG TGCTTGCCTC CGAAATCGCG CTTCAGCGTG GCGAGAGCGG CTTGGCTTAC
AACACCTACC TAGAGATGGC ACGCCAGTAC AAAGACCCTA GATTAGCTCA AAGAGCGATG
GAAATAGCCA TTGCTGGGGG ATCTCCAGAC CTAGCCATGC AAGCAGCCAA GACTTGGGAC
GAACTATCCC CAGCCTCAGA TACAAAACCT AAAGAGGTTT TGCTAACCCT ACAGATTCTG
AGCAACCGCT GGTCTGATGC AGTCAAGCCA GCCATTGCTT TACTCAACCA ACAAACGCCA
GCCCAACAAG AAAATACGCT TTTGCAATTG CAAGCTTTGC TAGCTAAAGC TAAAGATGAA
TCTGAAGCAA TGCGTGCTTT TTATGAAATT GCATCAGCCG TCAAAATTCC ACTAAAAGAT
CCTGGCCTAC TCTACACCTA CGCCATGTCT GCAGAAAAGG TGGGGCGCAT CGATGTAATG
GAAAAAACGT TGCGCGATAT CCTGCGCAAA AACCCAAATG ATGCAAATAT TTTAAATGCC
CTTGGCTATT CATTAGCCGA TCGAAATGTG AAATTACCAG AAGCATTTGT ACTCATTAGC
AAAGCACATC AACTATCTCC AAAAGATAGT TTTATTTTGG ATAGCTTAGG CTGGGTGAAT
TTTCGTCTTG GGAAAAATGC TCTCGCTTTA GAGCAACTAC AGCAAGCGTT TACGATGAAA
CCAGAAGCCG ATATTGCTGC TCATGTTGGA GAAGTACTGT GGGTCATGAA TCGCCATGCT
GAAGCAGAAG CGATGTGGCG ACAAGGCCAA AAGTTAGATG CTAACAATCC AACACTTAAA
GAAACCTTAG AGCGCTTTAA GCCTGATTGG ACAAGAGATG ATCAATCGGC CAAGGGTTCA
TGGGATGGGC GCTTTGCAGT CAAAGTGACC GGCCTCACAG ACGCACAAAA TCAAGGTGGA
TCCGGCGGCT TTACCTTAGC GCAAGAAGCA TTGAAAGATG TTCTAGAGAT ACGCAATCCA
ATGGGTGGCT CGATTGCAAA AATCATCATC ACGCCAGGAG AAGCAACCTT AGAGAGTGAT
GGCAAAGTAG TTACTGCGGC TGATGCAGAT ACATTAGTAC AAAATACTTT AGGCCTTCCT
CTCCCAGCGC GTGGATTATC CAACTGGTTA AGAGGTGAGG TGCGACCTGG AAGTGAAGCG
AGCGTGGATA GAAATGCCAA GGGGCAAGTT AATAAGATTA TTCAAGATGG CTGGAATTTA
GTTTATACCT GGAGCAACAC TAATCGCCTA GAAAAACTCA CCATGACGCG TAGCTCAAAT
ATTGGTTCGA TTGATATTCG ACTTGCATTT GATCGTCCAA ATGATTAA
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| Protein sequence | MSKFSLKPLL KGLFLVALTS GMISYSHAQP QANGLQTSEA VFEVLASEIA LQRGESGLAY
NTYLEMARQY KDPRLAQRAM EIAIAGGSPD LAMQAAKTWD ELSPASDTKP KEVLLTLQIL
SNRWSDAVKP AIALLNQQTP AQQENTLLQL QALLAKAKDE SEAMRAFYEI ASAVKIPLKD
PGLLYTYAMS AEKVGRIDVM EKTLRDILRK NPNDANILNA LGYSLADRNV KLPEAFVLIS
KAHQLSPKDS FILDSLGWVN FRLGKNALAL EQLQQAFTMK PEADIAAHVG EVLWVMNRHA
EAEAMWRQGQ KLDANNPTLK ETLERFKPDW TRDDQSAKGS WDGRFAVKVT GLTDAQNQGG
SGGFTLAQEA LKDVLEIRNP MGGSIAKIII TPGEATLESD GKVVTAADAD TLVQNTLGLP
LPARGLSNWL RGEVRPGSEA SVDRNAKGQV NKIIQDGWNL VYTWSNTNRL EKLTMTRSSN
IGSIDIRLAF DRPND
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