| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnec_1596 |
|---|
| Symbol | |
|---|
| ID | 6183509 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Polynucleobacter necessarius subsp. necessarius STIR1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010531 |
|---|
| Strand | - |
|---|
| Start bp | 1395327 |
|---|
| End bp | 1395770 |
|---|
| Gene Length | 444 bp |
|---|
| Protein Length | 147 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 44% |
|---|
| IMG OID | 641672114 |
|---|
| Product | NUDIX hydrolase |
|---|
| Protein accession | YP_001798285 |
|---|
| Protein GI | 171464172 |
|---|
| COG category | [L] Replication, recombination and repair
[R] General function prediction only |
|---|
| COG ID | [COG0494] NTP pyrophosphohydrolases including oxidative damage repair enzymes |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 0.159893 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 66 |
|---|
| Fosmid unclonability p-value | 0.642184 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | TTGAAAATCC CTATTTCGGT TTTAGTAGTT ATCTACAAAT CGAATAGGGA TGTTTTATTA
ATAGAGCGTG CTGATCGTGC TGGCTTTTGG CAATCGGTGA CCGGTAGCTT GGATGTTGCC
GATGAGGATC TTGCTTTAGC GGCTGCTCGT GAAGTATTTG AAGAGACGGG TATTGCTATA
GATCTGCTGC CACAAGATGC ATTACAAAAT ATGCACCACC AGATCGATTA TGAAATCTAT
CCAGAGTGGC GTTTTCGTTA TGCCCCCGGC GTTATTCGTA ATACTGAGCA CTGGTTCTCA
TTGGAAGTGC CTGATGGCAC CCCAATTAAA TTAGCGCCCA GAGAGCATGT GGCTTATGAG
TGGCTACCCT ACCAAGAGGC TGCCAAGAAA TGTTTTTCTC CAAGCAATGG AGAGGCCATT
TTGAAATTAT TTTCAGCGCA CTAA
|
|---|
| Protein sequence | MKIPISVLVV IYKSNRDVLL IERADRAGFW QSVTGSLDVA DEDLALAAAR EVFEETGIAI
DLLPQDALQN MHHQIDYEIY PEWRFRYAPG VIRNTEHWFS LEVPDGTPIK LAPREHVAYE
WLPYQEAAKK CFSPSNGEAI LKLFSAH
|
|---|
| |