| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnec_1574 |
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| Symbol | |
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| ID | 6183419 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polynucleobacter necessarius subsp. necessarius STIR1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010531 |
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| Strand | - |
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| Start bp | 1372791 |
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| End bp | 1375316 |
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| Gene Length | 2526 bp |
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| Protein Length | 841 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 641672094 |
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| Product | Organic solvent tolerance protein |
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| Protein accession | YP_001798265 |
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| Protein GI | 171464152 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1452] Organic solvent tolerance protein OstA |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 71 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGTCATT ATCGCCGTCG CGCCGGCCTT TGCGCCCCTC TTTTTTTGCA TGTAACCCTG
CGCGTAATGA TGGGGGTGGT ATTGCTGCAA TTTGCCCTTC CTGGGCGTGC ACAAGCCCCT
GCGCCTTTGC TTCCAAATTC GCAGGCTAGC GCCAATACTG TTTTGTTGCC GGATCGCGGT
AACGTCACCG TTTTAAAGTT GGATGATCAG CTGCGTACTG GAGTTCCTAT AGATGATGGT
AAGGCGCTTA CTTTTACGTC AAGCGATGCG ATTGAGGGTG TAGTTGATCG TAAGATGAAG
CTAAAAGGGC GCGCGCAAAT GCGTCGTAAC GGTGGAGTCA TTAAAGCCGA CGAAATTATT
TATGACCCCG ATACTGATAT AGCTGACTTA GTAGGTAATG CAGAGTTAAC GAAAGGCAAT
ACTACTTTTA AAGGACCAAC AGCCCAATTT AAAGTAGATG CACGCGAAGG TGAGATGGAA
GCGCCCATGT ATGAATTTCG AGATACTCGC GGGAATGGAA CTGCAAAAAA ACTGACTATT
GAAAACTCCG ATATTTTTGT TTTTGATAAG GCAACATATT CCACATGTAC ACCGCAAAAC
ATGGATTGGT ATTTTTCGGC CAGCACTTTA GAAATTGATA ACGAGCAAAA AGAAATGGTG
GGAACGCACG GCGTAATGCG TTTCTTTGAT GTACCTATTG CCTATGTTCC TTATTTCACC
CTTCCAACCT CAAATCAGCG ACGCACCGGC ATTTTGGCTC CTGTTGCTGG GTATAACTCC
AATAACGGCT TTGATGTTAC CCAGCCCTAT TACGTCAACA TCGCACCCAA TAGAGACTTA
TTGATTCTTT CGCGCTTTAT GAGTGAGCGC GGCTTACAGG TAGGTGCAAG CTATCGCTTT
TTGGATAGTA AATATACCGG CAGTTTAGGT GGTGATTACT TAGCGCACGA TAATAAAACG
GGAACCGATC GTTGGCGATA TGACTGGCAG CAGAGACAAG TGTTTAGTGG CAGCGTTGCA
CCCGGTGGTA TTTCAATGCC AGGCGCATGG ACGGGCTACG CGAATATGTC GCGCGTCTCC
GATAATTTAT ACCCAACTGA CTTCTCGCAA AGTATTGCTG GCGCTGTCAC TAGTCGGTTT
CGTCAAGAAG TGGGCACCGT TAAAAATCTG ACTGGTAGCT TAAGCAATTG GAATGTATCT
GCTAAAGCCT TGACCTTTCA AACTCTGCAG CCTGATCCAA CTGTTACAGT GCAAGCGCCG
TATAACGTGA TGCCAAATAT TACGGCTACC TATAACAATC GCCTTACACT AGCAGTAGGC
GATGCAAGTG GTAAGTATGT GACTCTACCG ACGACGGGTC CAGTCACAAC ATTTTCAGCT
GACTACACCA GGTTTGCATA CAACATCGCA GGTAATTTAG CCGCTACTGC GCCAGGCGTA
TACAGTCAGG CCGATAGAAC CGTTATCAAA GGTGCAATGG CTTTGCCTCG GGTGACGCCA
GGTTATTACG TTACACCTAA GGTGAGTTTT CAATCCAATA TGTATAATGC CACTCCGTTT
ACATCGGGTG GTACGCCGGT TGCTCAAGGA TTTACTATCC CAACCTTTAG CTTAGATTCT
GGATTGGCTT TTGAAAGAGA TGCAGCCGAG TTAAAAGGTT TCTATGGTCG GGATATGTTG
TTAACTATGG AGCCCCGCGT TTTTTATGTT TACACGCCTT ATCAGAGTCA AACACAAACT
CCTTTATTTG ATACTGCTGA TGCAGGCTTT GGCGTCTCTC AAATTTTTAG TGAAAACACC
TTTATTGGTA ATGACCGTAT AGCCGATAAC AATGCAGCGA CCCTTGGTTT GACAAGCCGT
ATGATTGAAG TAAATACTGG AGCTGAGCGC GCGAACGTAA CACTTGCTCA AAAACAGCAG
TTCACTGGGC AACGGGTGGG ACTGAATGGC AATATTGTGA ATCCAACAAC CTATTCGGAT
ACCTTGGGTT CTGGTTCGGT TCGATTACTC GGTAATTTCA GTGCGAGTGT TTTCGGGCAA
TACAACACTC AACTTAATCG TTTTGTTCAA ACCACGATTG GCGGTAGTTG GCGCCCGACC
CAGGGCAGAA GCTTAAATTT TGGATACCGC AATGTTTGGT CACCACCAGT ACAAGCATCC
GTTCAAAATA ATCAACCTTT TGTTCCATCA TCTACTACCA TGGATCAATA CAATATCTCC
GGTCAATGGC CCATCACTAG GGAAATTTCT GTTTTGGGTC GCTGGGTTTA TGACGCCCTG
ACCACAAAGA CCTTGAATAG CTTGCTAGCG CTAGAGTGGA ATAGGGATTG CTGGACTTTC
CGTGGCGCTT ATTCTCAAGT CCTTAATACT TCTCAGACAA TTACCACTCA GGTATTCTTC
CAGGTCGAAT TTAGGGGCTT TGGTAGCGTA GGAAGCAATC CAGTTGATAT CATGAGGTTA
AATGTTCCTG GATATATGCC TACCTCCAAG CTTATACCGC CTTCAACATA CGAGAACTAT
CAATAA
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| Protein sequence | MSHYRRRAGL CAPLFLHVTL RVMMGVVLLQ FALPGRAQAP APLLPNSQAS ANTVLLPDRG
NVTVLKLDDQ LRTGVPIDDG KALTFTSSDA IEGVVDRKMK LKGRAQMRRN GGVIKADEII
YDPDTDIADL VGNAELTKGN TTFKGPTAQF KVDAREGEME APMYEFRDTR GNGTAKKLTI
ENSDIFVFDK ATYSTCTPQN MDWYFSASTL EIDNEQKEMV GTHGVMRFFD VPIAYVPYFT
LPTSNQRRTG ILAPVAGYNS NNGFDVTQPY YVNIAPNRDL LILSRFMSER GLQVGASYRF
LDSKYTGSLG GDYLAHDNKT GTDRWRYDWQ QRQVFSGSVA PGGISMPGAW TGYANMSRVS
DNLYPTDFSQ SIAGAVTSRF RQEVGTVKNL TGSLSNWNVS AKALTFQTLQ PDPTVTVQAP
YNVMPNITAT YNNRLTLAVG DASGKYVTLP TTGPVTTFSA DYTRFAYNIA GNLAATAPGV
YSQADRTVIK GAMALPRVTP GYYVTPKVSF QSNMYNATPF TSGGTPVAQG FTIPTFSLDS
GLAFERDAAE LKGFYGRDML LTMEPRVFYV YTPYQSQTQT PLFDTADAGF GVSQIFSENT
FIGNDRIADN NAATLGLTSR MIEVNTGAER ANVTLAQKQQ FTGQRVGLNG NIVNPTTYSD
TLGSGSVRLL GNFSASVFGQ YNTQLNRFVQ TTIGGSWRPT QGRSLNFGYR NVWSPPVQAS
VQNNQPFVPS STTMDQYNIS GQWPITREIS VLGRWVYDAL TTKTLNSLLA LEWNRDCWTF
RGAYSQVLNT SQTITTQVFF QVEFRGFGSV GSNPVDIMRL NVPGYMPTSK LIPPSTYENY
Q
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