Gene Pnec_1561 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnec_1561 
Symbol 
ID6182956 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolynucleobacter necessarius subsp. necessarius STIR1 
KingdomBacteria 
Replicon accessionNC_010531 
Strand
Start bp1359116 
End bp1359526 
Gene Length411 bp 
Protein Length136 aa 
Translation table11 
GC content44% 
IMG OID641672082 
ProductRhodanese domain protein 
Protein accessionYP_001798253 
Protein GI171464140 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0607] Rhodanese-related sulfurtransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones86 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAAATTAA AGATTGGATA TCAAGAACTC ATTCAGAGTG CAATGGCAGA GATTGAGACC 
CTTCCTTTGG AAAAAGTGCA GCAATTGTTA ACGGATCCAG ATGTGGTCTT TGTAGATATT
CGTGATATTC GTGAATTAGA GCGTGAGGGC ATGATCCCTA ATGCGTTCCA TGCTCCTAGG
GGCATGTTGG AGTTCTGGGT TGATCCCGAC AGCCCTTATT ACAAGCCTAT TTTTGGCGAG
GGGAAGCGGC TGGTTTTATA TTGCGCCTCT GCCTGGCGTT CCGCTTTATC CACTCAAGCG
CTACAAAGAA TGGGTGTACC AAATATTTGT CATTTAGAGG GTGGTTTTAG TGCTTGGAAG
AAAGCGCAAT TGCCGACTGT AGAAAAAATA AGCAAACTCC ATTCCAGTTA A
 
Protein sequence
MKLKIGYQEL IQSAMAEIET LPLEKVQQLL TDPDVVFVDI RDIRELEREG MIPNAFHAPR 
GMLEFWVDPD SPYYKPIFGE GKRLVLYCAS AWRSALSTQA LQRMGVPNIC HLEGGFSAWK
KAQLPTVEKI SKLHSS