Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pnec_1561 |
Symbol | |
ID | 6182956 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Polynucleobacter necessarius subsp. necessarius STIR1 |
Kingdom | Bacteria |
Replicon accession | NC_010531 |
Strand | - |
Start bp | 1359116 |
End bp | 1359526 |
Gene Length | 411 bp |
Protein Length | 136 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 641672082 |
Product | Rhodanese domain protein |
Protein accession | YP_001798253 |
Protein GI | 171464140 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG0607] Rhodanese-related sulfurtransferase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 32 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 86 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGAAATTAA AGATTGGATA TCAAGAACTC ATTCAGAGTG CAATGGCAGA GATTGAGACC CTTCCTTTGG AAAAAGTGCA GCAATTGTTA ACGGATCCAG ATGTGGTCTT TGTAGATATT CGTGATATTC GTGAATTAGA GCGTGAGGGC ATGATCCCTA ATGCGTTCCA TGCTCCTAGG GGCATGTTGG AGTTCTGGGT TGATCCCGAC AGCCCTTATT ACAAGCCTAT TTTTGGCGAG GGGAAGCGGC TGGTTTTATA TTGCGCCTCT GCCTGGCGTT CCGCTTTATC CACTCAAGCG CTACAAAGAA TGGGTGTACC AAATATTTGT CATTTAGAGG GTGGTTTTAG TGCTTGGAAG AAAGCGCAAT TGCCGACTGT AGAAAAAATA AGCAAACTCC ATTCCAGTTA A
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Protein sequence | MKLKIGYQEL IQSAMAEIET LPLEKVQQLL TDPDVVFVDI RDIRELEREG MIPNAFHAPR GMLEFWVDPD SPYYKPIFGE GKRLVLYCAS AWRSALSTQA LQRMGVPNIC HLEGGFSAWK KAQLPTVEKI SKLHSS
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