Gene Pnec_1486 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnec_1486 
SymbolhemH 
ID6183747 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolynucleobacter necessarius subsp. necessarius STIR1 
KingdomBacteria 
Replicon accessionNC_010531 
Strand
Start bp1285886 
End bp1286980 
Gene Length1095 bp 
Protein Length364 aa 
Translation table11 
GC content47% 
IMG OID641672020 
Productferrochelatase 
Protein accessionYP_001798192 
Protein GI171464079 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0276] Protoheme ferro-lyase (ferrochelatase) 
TIGRFAM ID[TIGR00109] ferrochelatase 


Plasmid Coverage information

Num covering plasmid clones35 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones72 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGAACCCCA ACCCGCATCT TCGCGCTTCC AAAACTGCAG TCTTACTGTT GAACTTGGGA 
ACGCCATCGG CACCAACCCC AAAAGCAGTA CGTGCTTACT TAAAAGAATT TCTTTCTGAT
CGACGCGTAG TAGAAATTCC ACGAATTATT TGGTGGTGCA TTTTGAATGG CATTATTTTG
TCAATTCGCA GCAGCGCTTC TGCAAAAAAA TATGCTTCTA TTTGGTTGCC AAAATTAGGC
TCTCCTTTAA TGCATTACTC ACGCCTTCAG GCGAAAGAGC TTGGCGAAAT ATTTGCCAAT
GAGGGGCATA CGGTCTTGGT GGATTTGGCA ATGCGCTATG GACAACCTTC TACCCAGTCT
GTCCTAGAGG GCCTTAAGGC ACAAGGGATG GAGCGTTTGT TGTTGCTGCC TTTGTACCCC
CAATATTCAG CAACCACGAC GGCATCCAGC TTTGATGAAG TTTTTCGTGT TTTAAGTACC
TGGCGTGATC AGCCGGAATT ACGTTTGGTT AAGCACTATC ACGATAGTCC TGCTTATATT
TCTGCGCTAC GTGATCAAGT GTTAAGTAGC TGGGATGCAA ATGGGCGACC TGATTTTGCT
AAAGGCGATC GCTTTGTGAT GTCGTTTCAT GGATTGCCAA AACGCAATTT GATGAAGGGT
GACCCATACC ATTGTGAGTG CTTAAAAACA GGCCGCTTGC TGGGTGAGTC TTTAGGTTTA
GAGCCGGGTC AGTATATTGT GGCCTTCCAG TCGCGCTTTG GTAAGTCAGA GTGGTTAAAG
CCTTATACAG CCCCAACAAT TGAAAAGCTG GCTAAAGAAG GTTGTCAATG GTTGGACATT
TTTTGCCCAG GCTTTCCAGC GGATTGCTTG GAAACGCTCG AAGAGATTGC CATGGAAGCA
CGTGAAATTT TCTTAGAGCA CGGTGGCAAG GATTATCGTT ATATCCCCTG CTTAGACAGC
AACCCTAGGT GGATTGAGGC TTTAAGGGAT ATCGCCCACC ATCATTTGCA AGGCTGGCCT
CTGGGGGTAG AGCCCCAGGC CGAATTGGCT AAGCGCGCCG AAAGGGCTGA GCTCGTTGAG
AAAGCAAAGT ATTGA
 
Protein sequence
MNPNPHLRAS KTAVLLLNLG TPSAPTPKAV RAYLKEFLSD RRVVEIPRII WWCILNGIIL 
SIRSSASAKK YASIWLPKLG SPLMHYSRLQ AKELGEIFAN EGHTVLVDLA MRYGQPSTQS
VLEGLKAQGM ERLLLLPLYP QYSATTTASS FDEVFRVLST WRDQPELRLV KHYHDSPAYI
SALRDQVLSS WDANGRPDFA KGDRFVMSFH GLPKRNLMKG DPYHCECLKT GRLLGESLGL
EPGQYIVAFQ SRFGKSEWLK PYTAPTIEKL AKEGCQWLDI FCPGFPADCL ETLEEIAMEA
REIFLEHGGK DYRYIPCLDS NPRWIEALRD IAHHHLQGWP LGVEPQAELA KRAERAELVE
KAKY