| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnec_1443 |
|---|
| Symbol | argD |
|---|
| ID | 6183238 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Polynucleobacter necessarius subsp. necessarius STIR1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010531 |
|---|
| Strand | + |
|---|
| Start bp | 1245759 |
|---|
| End bp | 1246952 |
|---|
| Gene Length | 1194 bp |
|---|
| Protein Length | 397 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 47% |
|---|
| IMG OID | 641671983 |
|---|
| Product | acetylornithine transaminase protein |
|---|
| Protein accession | YP_001798155 |
|---|
| Protein GI | 171464042 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG4992] Ornithine/acetylornithine aminotransferase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 34 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 70 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAATAAGC CACTCCAGAC TATTGATACC CATTCAGTCA TGTTTATTAC ACCGCGTCCA
GAGGTGGTAA TGATGGAAGG CAAGGGATCA TGGTTAACGG ATAACAATGG CAAACGCTAT
TTGGACTTCC TGCAAGGCTG GGCAGTCAAT TGTTTGGGTC ACGGCAATCT GGGAATGATT
GAAGCGCTCA ATGCGCAAGC AAAAAAGTTG ATTAATCCAA GCCCTGCGTT CTACAACGAG
CCTATGATTG GCTTATCTAA TCTACTCACA GAAAACAGTT GCTTTAATAA AGTCTTCTTT
GCCAACAGCG GAGCAGAAGC CAACGAAGGC GCCATCAAAC TTGCTCGCAA ATGGGGTCAG
CTCAACAAAT CTGGCGCCTT TGAAATCGTC ACGTTTGACC ATAGTTTTCA TGGTCGCACA
TTGGCAACGA TGAGTGCTTC TGGCAAGCCA AACTGGGACA CTATGTTTGC CCCTCAAGTA
GCGGGCTTTC CTAAAGCAGA TTTAAATGAT TTGGAATCCG TCAAAAAACT CGTGACTAAT
AAGACGGTTG CAGTGATGCT CGAGCCCGTC CAAGGTGAAG GCGGCGTAAT TCCAGCTACT
CCAGAATTTA TGCGTGAGCT GCGCAATTTC ACCAAAGAAA ACAAGATTCT TTTGATCGTC
GATGAAGTTC AAGCAGGCTG CGGCCGGACC GGAGTCCTTT TTGCCTACCA AAACTACGGC
ATCGAGCCAG ACATCATGAC CTTAGGTAAA GGCATTGGTG GTGGTGTTCC ATTGGCAGCC
TTATTGGCTA CAGATGCAGT GGCTTGCTTT GTGCCAGGCG ATCAAGGTGG CACCTATAAC
GGTAATCCCT TGATGACTGC CGTAGGCATT AGTGTAATTG AGCAACTCTT GGCTCCAGGA
TTTTTAGATT GTGTGAAAGC AAAGGGCGAG CTACTCAAAT CCGAGTTACT CAAACTGGTG
ACCGAGCTCA ACCTTGAAGG TGAACGTGGC AAAGGCTTAC TACGCGCTTT AATGCTTGGA
AAAGATATCG GCCCAAAACT CGTTGAACTA GCGCGTGATC ACAGCCCTGA AGGTTTGTTG
ATTAATTCAC CAAGACCCAA CCTCTTGCGC TTTATGCCAG CCTTAAATGT ATCTGATGAT
GAAATTCGTC AGATGTGCAA TATGCTGCGC ACGCTACTCA AAGACGTAGC TTAA
|
|---|
| Protein sequence | MNKPLQTIDT HSVMFITPRP EVVMMEGKGS WLTDNNGKRY LDFLQGWAVN CLGHGNLGMI
EALNAQAKKL INPSPAFYNE PMIGLSNLLT ENSCFNKVFF ANSGAEANEG AIKLARKWGQ
LNKSGAFEIV TFDHSFHGRT LATMSASGKP NWDTMFAPQV AGFPKADLND LESVKKLVTN
KTVAVMLEPV QGEGGVIPAT PEFMRELRNF TKENKILLIV DEVQAGCGRT GVLFAYQNYG
IEPDIMTLGK GIGGGVPLAA LLATDAVACF VPGDQGGTYN GNPLMTAVGI SVIEQLLAPG
FLDCVKAKGE LLKSELLKLV TELNLEGERG KGLLRALMLG KDIGPKLVEL ARDHSPEGLL
INSPRPNLLR FMPALNVSDD EIRQMCNMLR TLLKDVA
|
|---|
| |