Gene Pnec_1438 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnec_1438 
Symbol 
ID6184344 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolynucleobacter necessarius subsp. necessarius STIR1 
KingdomBacteria 
Replicon accessionNC_010531 
Strand+ 
Start bp1239899 
End bp1240360 
Gene Length462 bp 
Protein Length153 aa 
Translation table11 
GC content44% 
IMG OID641671978 
Productprotein of unknown function DUF1468 
Protein accessionYP_001798150 
Protein GI171464037 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones67 
Fosmid unclonability p-value0.832604 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGAAAATTC GCAATCAACG GGATTTTGGG GCCGGGGTCA TGTATATGGT CATTGGCCTA 
TTCTTTGCCA TTTTGGCCTC AAATTATCCA ATGGGAACTG CGGCCAAAAT GGGTCCAGGC 
TACCTCCCTT TCTACCTGGG CATTTTAATG TTCCTATTAG GCGTTTTAGT AGCTGTTAAA 
GCGTTTAGCG CCAAAGCGGC CATTGAATCG ATCCCTAAAT TTAATTGGCG CATCATTGCC 
CAAATTACCG GTGCAGTAGT GCTTTATGGC TTTTTGCTTC CACGACTCGG GTTCTTAATT 
GCCGTAGTGG TATTGGTTTT TGTTGCTGCT AGCGCAAGCA GAGAATTTAC TTGGAAAGGC 
ACTACAATCA ATGCAGCCTT CTTGGTGACA TTTACTTATT CAGTATTTGT ATTGGGTCTG 
AAGCTTCAGT TCCCATTACT GCCTGCATTC CTACAACAAT AA
 
Protein sequence
MKIRNQRDFG AGVMYMVIGL FFAILASNYP MGTAAKMGPG YLPFYLGILM FLLGVLVAVK 
AFSAKAAIES IPKFNWRIIA QITGAVVLYG FLLPRLGFLI AVVVLVFVAA SASREFTWKG 
TTINAAFLVT FTYSVFVLGL KLQFPLLPAF LQQ