| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnec_1427 |
|---|
| Symbol | |
|---|
| ID | 6183547 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Polynucleobacter necessarius subsp. necessarius STIR1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010531 |
|---|
| Strand | - |
|---|
| Start bp | 1223875 |
|---|
| End bp | 1224648 |
|---|
| Gene Length | 774 bp |
|---|
| Protein Length | 257 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 46% |
|---|
| IMG OID | 641671968 |
|---|
| Product | zinc/iron permease |
|---|
| Protein accession | YP_001798140 |
|---|
| Protein GI | 171464027 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG0428] Predicted divalent heavy-metal cations transporter |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 29 |
|---|
| Plasmid unclonability p-value | 0.860799 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 68 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCAGTTT TACAAAGCAT TCTTCTAGTC ACCGCATTAG CTGGTACAGC TAGCGTCTTA
GTGGCCGCTA GTTGCTCTAT GACCATGCTA TCTAAGATGG TCAACAATAT GGTTAGCTTG
TCGGTGGGTA TATTACTGGC AACAGCATTA CTTCACTCAT TGCCTGAGGC GTTCAACATG
GAGGGTGTAA ATCCTCAATA CTTGTTTGCC ACTTTACTTG CTGGATTGCT TGGCTTCTTC
TTGTTGGAAA AAATTGCCTT GTTGCGCCAC GACCATCATC ACGAAGGTGA TGGTCATCAC
CATCACCATG GGCATGACGC CGAAAATGCT GGCCGTAGCG GTTGGATGAT TTTGGTTGGC
GATGGTATTC ACAACTTTGT CGATGGGATT TTGATTGCAG CAGCCTTCAT GGTTGATTAT
CAAGTCGGCA TTTTTACGGC TATCGCCATC ATCGCCCATG AAATTCCGCA AGAGATTGGC
GACTTCATCG TCTTGTTTAA TGCTGGATTC TCACGTGCAC GTGCTCTGCT CTATAACTTT
ATCTGCGGCT TGTCAGCTGT TGTTGGCGGG GTTTTGGCTT ATTTCTTTTT GGAAAGAGCG
CATGCCGCGA TGCCGTATTT GCTAGTCATT GCTTCTAGCA GCTTTATTTA TATTGCAGTT
AGTGATTTAA TTCCGCAAAT GCACCGCCGT CCACACTGGG CTGAATCATT GCGTCAAACG
ATTTTGATTG CCTGTGGCGT GGGATTTGTT GTGCTGCTAT CCCTACTGCA TTAA
|
|---|
| Protein sequence | MSVLQSILLV TALAGTASVL VAASCSMTML SKMVNNMVSL SVGILLATAL LHSLPEAFNM
EGVNPQYLFA TLLAGLLGFF LLEKIALLRH DHHHEGDGHH HHHGHDAENA GRSGWMILVG
DGIHNFVDGI LIAAAFMVDY QVGIFTAIAI IAHEIPQEIG DFIVLFNAGF SRARALLYNF
ICGLSAVVGG VLAYFFLERA HAAMPYLLVI ASSSFIYIAV SDLIPQMHRR PHWAESLRQT
ILIACGVGFV VLLSLLH
|
|---|
| |