| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnec_1365 |
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| Symbol | |
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| ID | 6183608 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polynucleobacter necessarius subsp. necessarius STIR1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010531 |
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| Strand | - |
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| Start bp | 1176224 |
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| End bp | 1178656 |
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| Gene Length | 2433 bp |
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| Protein Length | 810 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 641671917 |
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| Product | heavy metal translocating P-type ATPase |
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| Protein accession | YP_001798090 |
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| Protein GI | 171463977 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG2217] Cation transport ATPase |
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| TIGRFAM ID | [TIGR01494] ATPase, P-type (transporting), HAD superfamily, subfamily IC
[TIGR01525] heavy metal translocating P-type ATPase |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 62 |
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| Fosmid unclonability p-value | 0.576345 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAATAAAA CCAATTCCTT AATTTGCTAT CACTGCTCAA GTCAAATTCT CCCAGCCGAT
TTAATAGAGG CAGAGTTGGG TGGTGAGTCC CGATTATTTT GTTGCCCTGG ATGTATGGCT
ATCGCACAAA CGATTCATGG TGAGGGTCTG GAGGTGTTTT ATGCTCGGCG TTCCCAGTCT
GGCGATAAGC CGGCAGCCTA TCTAGCAAGT AATGAAATCC CTGAAAAACT CAAGCCTTAT
GATGATCCTT CATTGCTGGG ACGTTTCACG CGTGCCGATG GAGGGGGTGA CGATTTAGTT
ACGACATTGC GGCTAGAGAA AATTCGCTGT GCGGCTTGTG TTTGGTTATG CGAACAACAT
TTACGTCGCA TCGCTGGCGT TAAAGATGTG CAAATTAATT ACGTTACTCA AAAAGTGATT
GTGCATTTTT CTCCTGAGAA AACAAGCTTA GCAAGACTCC TTTTTGAAAT TGAACGCATT
GGCTATGAGG CTTGGCCGTT CGAGCACTCA CAATCTCTCG ATAAGGCAAA AACAGAGAGA
CGAAAATTAC TAATGAGGTT GGGTGTTGCT ATGCTGGGCA TGATGCAAGT CATGATGTAC
GCCTGGCCAA CATATACCGG CTCTGATATT ACGCCGGAGT TTGATTTATT GATGGGTTGG
GCAAGCTGGG CTCTAACAGT GCCCGTGATG GTGTATTCAG CGGGGCCTAT ATTTCAAGCG
GCATGGCGGA GTTTGCGGTC ATTTCGGCAG ACATACACGC TTGGTATGGA TGTCCCCATA
GCATTGGCAT TGGCATTGGC TTTTATTGCC GGCTCAATTA ATTTGGTGAC GGGGTCAGGA
AAAAGCTACT TTGATTCCAT TACGATGTTT GTAGCTTTTA TTTTGGCCGC AAGATATGTT
GAATTATTAG CAAGACAAGA TGCTCAAGGT GGTGCAGAGG CTCTTGCAAA GCAGTTGCCC
GCAACCTGCG AACGCGCACC GAATTATCCT GCATCACAAG AAATTGAGGT TGTGCCGGTA
GTGAATTGTA ATCCTGGCGA GGTGTTGCGA GTATCTCCGG GCGAGGTTGT TCCTGCTGAT
GGTATCTTGA TTGAGAATGT CAGTGCTCTA GATGAGTCTT TGCTCACTGG TGAATCTAAA
CCAGTTGAGA AAACAATTGG TGATCGCGTG TATGCGGGAA CGCACAACAT CCTCAATCCC
TTCTTTATGA GAGTTGATGC AGTTGGGCAA TCAACCCGCA TTGCAGGGAT TGCTTCATTA
TTGGATCAAG CTTTACTTGC TAAGCCGGTA ATGGTGAGCC TTGCAGAAAA GTGGACAGCA
TACTTTGTCG CATTTTTATT GCTAAGTGCA TTTGCTTCCT CTGCAATTTG GTTTTACTTT
GATCCTAGTC GCGCTTGGAC TGTTCTAGTT TCAGTACTTG TTGCAAGTTG CCCCTGTGCG
TTATCACTTG CAGTGCCTAC TGCCATGGCA GCTGCCCAAG GTGCAGTAAC AAAATTAGGT
TTGCTGATTG TGCGTGGCCA TGTAATAGAA GGCTTGGTAA AAGCAACCGA TTTGGTGCTT
GATAAAACCG GTACCCTAAC AATGGGTCAG CCAGAGTTAC AAGAAATTAT CAATTTACGC
CCAGGTTATT GCCGCGAAGA TGCATTAGCG TTGGCAGCGG CATTAGAAGT AGGTCAGAGA
CATCCATTAG CACTCTCTTT GATACGTGCT GCAGAAGCTG AAAACCTATC TCTCCCTGCC
TTAAGCGAAC CAGTCACCAA TCTATTAGGT AGGGGTTTGA GCTCTGGAGC TTATCGCCTG
GGAAGTGCTT TATGGCTTGG GGTTGAGCAG GGTGCTCAAT TGGGTCAATA CGGTCAAGTA
CATTTGGCCG ATGAGGATGG TTTGGTAGCC AGCTTTATTT TTCTAGATAC GCCAAGAGTT
GGGCTGGAGC AATTTTTAAA AACAGTCAAA GCTCGAAATA TTTCTGTGCA TTTGGTTTCA
GGGGATGATC AAGAAACCGT TGCATGGTGG GCTCACCATG TTGGCATTGA GAGCTATCAA
GGCGGATGCA CTCCTGAAGA TAAATACGAC TACATTGAGT GTTTACAAAA AGAGCATCGT
TTTGTTTGGG CCATTGGTGA TGGCGTTAAT GATGCGCCCT TGCTGGCGCG TGCGGATGTT
TCGATTGCGG TTGGTGCAGG TGCACCGTTA GCTGCAGCAG GTGCAGATGC CATTCTCACT
GCTGCCTCTT TAGAGCCTTT GGCTAAAACA TTGTTATTAG CCGATAAAAC TCAAACCATC
ATTAAAGAAA ACTTATGGTG GGCTTTGGTT TACAACCTAT TGGCAATTCC TGCTGCGATG
ATGGGTTGGG TTAATCCTTG GGTTGCTGGA ATCGGAATGT CACTTTCATC GCTGGCGGTG
ACATTAAACG CTTGGCGTTT GCGAAAAGTT TAG
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| Protein sequence | MNKTNSLICY HCSSQILPAD LIEAELGGES RLFCCPGCMA IAQTIHGEGL EVFYARRSQS
GDKPAAYLAS NEIPEKLKPY DDPSLLGRFT RADGGGDDLV TTLRLEKIRC AACVWLCEQH
LRRIAGVKDV QINYVTQKVI VHFSPEKTSL ARLLFEIERI GYEAWPFEHS QSLDKAKTER
RKLLMRLGVA MLGMMQVMMY AWPTYTGSDI TPEFDLLMGW ASWALTVPVM VYSAGPIFQA
AWRSLRSFRQ TYTLGMDVPI ALALALAFIA GSINLVTGSG KSYFDSITMF VAFILAARYV
ELLARQDAQG GAEALAKQLP ATCERAPNYP ASQEIEVVPV VNCNPGEVLR VSPGEVVPAD
GILIENVSAL DESLLTGESK PVEKTIGDRV YAGTHNILNP FFMRVDAVGQ STRIAGIASL
LDQALLAKPV MVSLAEKWTA YFVAFLLLSA FASSAIWFYF DPSRAWTVLV SVLVASCPCA
LSLAVPTAMA AAQGAVTKLG LLIVRGHVIE GLVKATDLVL DKTGTLTMGQ PELQEIINLR
PGYCREDALA LAAALEVGQR HPLALSLIRA AEAENLSLPA LSEPVTNLLG RGLSSGAYRL
GSALWLGVEQ GAQLGQYGQV HLADEDGLVA SFIFLDTPRV GLEQFLKTVK ARNISVHLVS
GDDQETVAWW AHHVGIESYQ GGCTPEDKYD YIECLQKEHR FVWAIGDGVN DAPLLARADV
SIAVGAGAPL AAAGADAILT AASLEPLAKT LLLADKTQTI IKENLWWALV YNLLAIPAAM
MGWVNPWVAG IGMSLSSLAV TLNAWRLRKV
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