| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnec_1319 |
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| Symbol | |
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| ID | 6183267 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polynucleobacter necessarius subsp. necessarius STIR1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010531 |
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| Strand | - |
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| Start bp | 1143504 |
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| End bp | 1144391 |
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| Gene Length | 888 bp |
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| Protein Length | 295 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 641671880 |
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| Product | TPR repeat-containing protein |
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| Protein accession | YP_001798053 |
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| Protein GI | 171463940 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG3914] Predicted O-linked N-acetylglucosamine transferase, SPINDLY family |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.000000490816 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 6 |
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| Fosmid unclonability p-value | 8.5993e-22 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGACGGGGG CGTATGAATG CCATGACCCA GAGTTTTTTG AAATCTATGC CTTGGATAAT
GGCTGGGATG ATGGCGGCAT TTTGAGGCCT CGGATGAAAG ATGCTTTTAA AGAAATGATC
GACATTAATC AGAAGACGGA TCTGGAAGTT ATTCAATTAA TTCAGGATTT GAACATTGAT
ATCCTGGTCA ACTTAAACGG CTATTTTGGT GAAGGGCGTC AAAATATTTT TGCTTCGCAC
CCGGCGCCCA TACAAGTAAA TTATTTAGGG TTCCCAGGAA CCTTGGGCGC TGAATATGTG
GATTATTTAA TAGCCGATCC AATAGTGATC CCACTCGAAA GTCGTCAGTA TTACGTGGAA
AAAATTGCTT ATATGCCTGA TAGTTATCAG GCTAATGATT CGAAGCGCAT GATTTCTGAG
AGGAAGTTTT CCAGGACGGA GTTGGGTCTG CCGGAAGCTG GTTTTGTCTA CTGTTGTTTT
AACAACAATT ACAAAATTAC ACCTGAAATT TTTGATCGTT GGACACAAAT ACTGTTAGCA
GTAGAGGGAA GTGTTTTGTG GTTGATTCAG GATAATGCTC CAGCTGAAAA AAACCTAAAG
GCCGAGGTAT TGAAAAGAGG CGTTGCTCCT GAGCGCATTA TTTTTGCGAA AAGATTGTCC
CTGCCGGAGC ACTTAGCTCG TCACAAAATG GCAGATCTTT TCTTAGACAC CCTTCCTTAC
AATGCTCACA CTACTGCAAG CGATTCGCTT TGGGCTGGTG TGCCGGTATT GACTCTTCTG
GGCAGCACTT TTCCAGGTAG GGTTTCAGCA AGCCTGCTAA ACGCGCTTGA CCTGCAAGAG
CTGTTGCTAA AACACCAGAA GAATGCGAGC AGCGCGCGAT TGAATTAG
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| Protein sequence | MTGAYECHDP EFFEIYALDN GWDDGGILRP RMKDAFKEMI DINQKTDLEV IQLIQDLNID
ILVNLNGYFG EGRQNIFASH PAPIQVNYLG FPGTLGAEYV DYLIADPIVI PLESRQYYVE
KIAYMPDSYQ ANDSKRMISE RKFSRTELGL PEAGFVYCCF NNNYKITPEI FDRWTQILLA
VEGSVLWLIQ DNAPAEKNLK AEVLKRGVAP ERIIFAKRLS LPEHLARHKM ADLFLDTLPY
NAHTTASDSL WAGVPVLTLL GSTFPGRVSA SLLNALDLQE LLLKHQKNAS SARLN
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