| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnec_1279 |
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| Symbol | |
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| ID | 6183908 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polynucleobacter necessarius subsp. necessarius STIR1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010531 |
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| Strand | - |
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| Start bp | 1109211 |
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| End bp | 1110170 |
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| Gene Length | 960 bp |
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| Protein Length | 319 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 641671847 |
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| Product | cobalamin biosynthesis protein CbiB |
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| Protein accession | YP_001798020 |
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| Protein GI | 171463907 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG1270] Cobalamin biosynthesis protein CobD/CbiB |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.00447148 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 66 |
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| Fosmid unclonability p-value | 0.925435 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACTTTCT TTTCTATTCT CTTCGCCCTC ATTGCTGAGC AATATCGCCC AGTAACTTCA
AGCCATTGGA TTGCGCGTGT CTGCGCTCGC TGGTTGGATT GGGTCGCCAC TGAGTTCGGT
GGTAAGACTG AAGAAGGCGC AAGCCCAGTG GGTGCGCGTA TGGCTTGCTT GGTAGCTTTC
GTATTGCCAA CCTTTTTAGT ATTTATTGTG TATGTCACTT GCATGGTGAC TTATCCAATC
CTAGGATTTA TTTGGAACAT TGTCATCGCG TATTTGTTCT TTGGCTTTCG TCAGTTCAGT
CATTCATTTA CTACGGTACA TGAGGCAATT GAGGCTCACG ACTTGCTAGC TGCTCGAGCT
GCTCTAGGTG AGTGGTACGG TCCTCAGTTA GATGTTTCCA ATCTAACTGA GACAGAAGTT
ATCTCATTGG CTTTAGAACG TGCCATTATT GGTTCGCATC ACCACGTCTT TGGTGTGTTG
TTTTGGTTCA TGATGCCAAT GGGCCCTGCA GGTGTTGTGC TGTATCGCTT GGCTGATATT
GCTGCGCAGC GCTGGTCTGA GCGCGGAGAC TTTAATTTAA GCGAATCAGC TCGTCATTTC
TTCTATGTAT TGGACTGGGT TCCTGCGTGC ATTACTGCAA TGGGCTTTGC GATTGTTGGT
AACTTTGAAG GCGCAGTGTA TGGTTGGCGT TATCTGACGC AAAAATGGTC TGACTCTTTA
TTTGCAGTGA TTTTGGCTGC TGGTAGTGGT GCGCTTGGCG TTCGTTTAGG TGAGCCGATG
AGTGAGCCAG ATAGCGATGA GGCTTTACGC ATGGCTGAAG CAGGAGAGCC AGTAATTTAT
GAAGTGGGTC TTGAGCCTAC TGAGCGCACT ATGCGCTCTG CAGTTGGATT GGTATGGCGC
TTGGTTATCG CTTGGATGGC TTTGTTGCTA ATGCTGACCA TCGCTCTTTG GCTTGGCTAA
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| Protein sequence | MTFFSILFAL IAEQYRPVTS SHWIARVCAR WLDWVATEFG GKTEEGASPV GARMACLVAF
VLPTFLVFIV YVTCMVTYPI LGFIWNIVIA YLFFGFRQFS HSFTTVHEAI EAHDLLAARA
ALGEWYGPQL DVSNLTETEV ISLALERAII GSHHHVFGVL FWFMMPMGPA GVVLYRLADI
AAQRWSERGD FNLSESARHF FYVLDWVPAC ITAMGFAIVG NFEGAVYGWR YLTQKWSDSL
FAVILAAGSG ALGVRLGEPM SEPDSDEALR MAEAGEPVIY EVGLEPTERT MRSAVGLVWR
LVIAWMALLL MLTIALWLG
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