| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnec_1270 |
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| Symbol | |
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| ID | 6183676 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polynucleobacter necessarius subsp. necessarius STIR1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010531 |
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| Strand | - |
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| Start bp | 1100436 |
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| End bp | 1101665 |
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| Gene Length | 1230 bp |
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| Protein Length | 409 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 641671839 |
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| Product | sodium:dicarboxylate symporter |
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| Protein accession | YP_001798012 |
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| Protein GI | 171463899 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1301] Na+/H+-dicarboxylate symporters |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 35 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 65 |
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| Fosmid unclonability p-value | 0.792848 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAATTCTA AAAAGCTAAC CAACTTCATT TTGGGGGCAA TGGTCTTGGG TGTGCTGGTG
GGTTATTTGG TTAACCTCTA CGGCGCAGGA AGCTCTCTTC CTGAAGGGTA TGTGTGCTAC
ATCTCTATTC TGACGGATGT ATTTTTGCGT CTGATCAAAA TGATCATTGC TCCATTGGTT
TTTGCTACCT TGGTTGTTGG TATTGCCAAA ATGGGTGATG CCTCAATGAT TGGTCGAGTC
GGATTAAAAA CCTTTGCATG GTTTATCTCC ATGTCGCTGG TATCTCTGTT GCTTGGTTTA
GTGATGGTCA ATATTTTGCA GCCGGGCGTT GGGGTGGATT TGACTCTCCC TGAAATTGCT
GCCAATACAG GATTAAATAA AAATAGCCTA AATCTTCCGG AGTTTGTGCG ACACACTTTT
CCTGTCAGTA TCTTTGATGC CATGGCGAAA AACGAAATCC TGCAAATTGT TGTATTTGCT
GTTTTCTTTG GTGTGGGGGC CGCCGGTATG GGTTCGCGCG CCGATGAATT CGTTCGTAAT
CTCGATATGC TCTCGCACAT CATGCTCAAG ATTACGACGG CGGTGATGAA GTTTGCACCT
GTAGCCGTGT TTTCCACTGT TTCATCTGTA ATTGCCGAGA ATGGCGTCAG CATTCTGATG
ACATACGGTA AATTTATGCT TAGCTTTTAC GTATCTATCT TTACGCTATG GCTAGTAATT
ATTCTGATTA GCTCTCTTGT TCTTAAAAAA CGTACTTGGC ACTTAGTAAA AATGTTGCGT
GAGCCAGCAT TGCTTGCATT TACTACCGCA AGTTCTGAGG CAGCATATCC GATGACTTTG
GAGCGAGTAG AGCGCTTTGG GTGCAAAAAC AAAATAGCAT CTTTTGTTTT GCCTGTAGGC
TATTCGTTTA ATTTAGATGG CTCCATGATG TATTGCACGT TTGCTGCGGT CTTTATTGCA
CAGGTCTACG GTATTGAGAT GGAGCTTAGC CAACAGCTAT TGATGCTATT GGTTTTAATG
ATTACCTCTA AAGGTATTGC GGGTGTACCC AGAGCATCGC TGGTGGTAAT TGCTGCAACT
CTTTCGCAAT TTAACTTGCC AGAAGCGGGG GTGTTGTTGA TTTTGGGAGT GGATCATTTC
TTGGATATGG CGCGTTCTGC AACCAATGTA TTGGGTAACG GCTTGGCTAC AGCCGTTATT
TCGAAGTGGG AAGGCGAGTT AGAGGGCTAG
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| Protein sequence | MNSKKLTNFI LGAMVLGVLV GYLVNLYGAG SSLPEGYVCY ISILTDVFLR LIKMIIAPLV
FATLVVGIAK MGDASMIGRV GLKTFAWFIS MSLVSLLLGL VMVNILQPGV GVDLTLPEIA
ANTGLNKNSL NLPEFVRHTF PVSIFDAMAK NEILQIVVFA VFFGVGAAGM GSRADEFVRN
LDMLSHIMLK ITTAVMKFAP VAVFSTVSSV IAENGVSILM TYGKFMLSFY VSIFTLWLVI
ILISSLVLKK RTWHLVKMLR EPALLAFTTA SSEAAYPMTL ERVERFGCKN KIASFVLPVG
YSFNLDGSMM YCTFAAVFIA QVYGIEMELS QQLLMLLVLM ITSKGIAGVP RASLVVIAAT
LSQFNLPEAG VLLILGVDHF LDMARSATNV LGNGLATAVI SKWEGELEG
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