| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnec_1230 |
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| Symbol | |
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| ID | 6183407 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polynucleobacter necessarius subsp. necessarius STIR1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010531 |
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| Strand | - |
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| Start bp | 1062739 |
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| End bp | 1063407 |
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| Gene Length | 669 bp |
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| Protein Length | 222 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 641671805 |
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| Product | transcriptional regulator, LysR family |
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| Protein accession | YP_001797980 |
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| Protein GI | 171463867 |
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| COG category | [K] Transcription |
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| COG ID | [COG0583] Transcriptional regulator |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 34 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 79 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTGAACG ATGAGTTGAC GCTGCGCAAG TTAGAAATTC TTTGTTCGTT TGTGCGGACG
GGGAGTCTTA CGCGAACTGC AGAAGAATTA CATCTAAGTT CAGTCAGCAT TCATAAAGCA
TTACATTCTT TAGAGTCCGG AATTGATTGC CCTTTATTTG TTAAAGAGGG TCGTCAATTA
AAAGCCTTGC CTGCAGCGCT TTATTTGGCT GAGGCAAGCG CAGATTTATT GTCTGATGTT
GACCGAATTC TCAAAAAGAC AAGAGCAAAA GCAGGGGTGG AGAGCGGGCA GATTCGCTTG
GGCTCAATGT ACTCTTTGAC CGCCAACATC ATTCCCCGCA TCATCATGGG TACCAAAATT
CGTCGTCCTG ATTTGGATGT TGACCTATTC CTTGGGTCCA ATGAGGATTT GATGAAGCGT
TTGACTGAGG GCACTGTAGA TGCGGTGGTG ATTGCCGTCC CTTCGCAAAA TCTTCCTGAA
GGAGTGCAGG CGGTCCCCCT TTTTGAGGAT CAGCTTTATC TGGCATCGTC TAAAGGCAAT
AAGCCCACAC AAACTGATAT TGACTTATCG GAGTATCAAA CGAAAAATTT CTTACTCTTC
AAGATGGCTT TGCCACTACC TCTGGATTCT ATGAGGCCTT TCAGCTGGCA GGATTTAAGC
CCAATGTAG
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| Protein sequence | MLNDELTLRK LEILCSFVRT GSLTRTAEEL HLSSVSIHKA LHSLESGIDC PLFVKEGRQL
KALPAALYLA EASADLLSDV DRILKKTRAK AGVESGQIRL GSMYSLTANI IPRIIMGTKI
RRPDLDVDLF LGSNEDLMKR LTEGTVDAVV IAVPSQNLPE GVQAVPLFED QLYLASSKGN
KPTQTDIDLS EYQTKNFLLF KMALPLPLDS MRPFSWQDLS PM
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