Gene Pnec_1218 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnec_1218 
Symbol 
ID6183750 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolynucleobacter necessarius subsp. necessarius STIR1 
KingdomBacteria 
Replicon accessionNC_010531 
Strand
Start bp1052517 
End bp1052870 
Gene Length354 bp 
Protein Length117 aa 
Translation table11 
GC content46% 
IMG OID641671799 
Productformyl-coenzyme A transferase 
Protein accessionYP_001797975 
Protein GI171463862 
COG category[C] Energy production and conversion 
COG ID[COG1804] Predicted acyl-CoA transferases/carnitine dehydratase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value0.437775 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones73 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACTAAAC CATTAGACGG TATTCGTATT ATTGACTTCA CACACGTACA AGCAGGTCCT 
GCATGTACTC AGCTGTTGGC CTGGTATGGT GCTGACGTGA TTAAAGTAGA GCGCCCAGGC
GCTGGCGACG TAACCCGCAG CCAATTGCGC GATATTCCAG GTGCAGATGC TTTGTACTTC
ACGATGTTGA ATGGTAATAA GCGTTCTTTG ACTTTGGATA CCAAGACTGC CGAAGGTAAA
GAAGTTTTAG AGAAGATGAT CAAGACTTCA GATGTCATGG TTGAGAACTT TGGTCCAGGC
GCCTTGGATC GTATGGGATT CTCATGGAGG CGTATTCAAG AATTGAATCC ATAA
 
Protein sequence
MTKPLDGIRI IDFTHVQAGP ACTQLLAWYG ADVIKVERPG AGDVTRSQLR DIPGADALYF 
TMLNGNKRSL TLDTKTAEGK EVLEKMIKTS DVMVENFGPG ALDRMGFSWR RIQELNP