Gene Pnec_1196 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnec_1196 
Symbol 
ID6183862 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolynucleobacter necessarius subsp. necessarius STIR1 
KingdomBacteria 
Replicon accessionNC_010531 
Strand- 
Start bp1034015 
End bp1034323 
Gene Length309 bp 
Protein Length102 aa 
Translation table11 
GC content50% 
IMG OID641671779 
Producthypothetical protein 
Protein accessionYP_001797955 
Protein GI171463842 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones35 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones57 
Fosmid unclonability p-value0.0884175 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGATGGA ATGGCTCTCG TATAGTCTTT TATCGCCAGC AAGCGCCGGA ATTGTGGATT 
TCTCAAGCCA TCTGCTTGGG ACCTTATTTG CCTGGCCCCA ATTCGCATTA TGCCTTAACC 
ATTGCCGTCC AGAAAGGTTG GCGTTATGGC GCATGGGGTG CGCTTGGAAT CTTTATTGGC 
GACTCAGTAT TGATGCTCGC AGTTGTGTTG GGTGCCGCAT CCATCTTGAC TCTGTCCCCA 
TCATTTTTAG TCTTGTGCGC ATTTTGGGGG CTGTCTACCT GGCCTGGATG GGTTACGGCT 
TATTGCTAA
 
Protein sequence
MRWNGSRIVF YRQQAPELWI SQAICLGPYL PGPNSHYALT IAVQKGWRYG AWGALGIFIG 
DSVLMLAVVL GAASILTLSP SFLVLCAFWG LSTWPGWVTA YC