Gene Pnec_1144 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnec_1144 
Symbol 
ID6183405 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolynucleobacter necessarius subsp. necessarius STIR1 
KingdomBacteria 
Replicon accessionNC_010531 
Strand- 
Start bp994862 
End bp995677 
Gene Length816 bp 
Protein Length271 aa 
Translation table11 
GC content47% 
IMG OID641671746 
Producthypothetical protein 
Protein accessionYP_001797923 
Protein GI171463810 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones56 
Fosmid unclonability p-value0.069789 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTTTGCC TCAAATCATT TAGAGCCCTG TATCTTGCAT TGACGGCGGT ATTGTTGTTT 
GGTTTGGTTG CTTGCGGGGG CGGGGGTGGC AGCAGTAGTA GCGCTACTAG CGCGGCTACT 
CCTAGCGTCT ATTACGTAGT TAGCAATACT AATGATTCGG GTGCCGGCTC CCTAAGAGAC 
GCAATTACTT CGGTTAATGC CTCATCTTCT TCCCAGTATT CAGGAATCAC TTTCTCCGTG 
GCCGGGGTTA TCACATTGAA AAGCGATTTA CCTGCGTTGA CCAAGAAGGT CTTGATAGAT 
GGCACAACTG CACCTGGTTA TGTGGCTGGT AATACAACTG CCGCCCCTGT TGTCGCAGTC 
AACTTCGACA GCGCAGGATC GGGCTTTATT TTTGATAGTG GTTCTGCTGG TTCAGGAATT 
ACTGCTCTAT CGATCATCAG CTCAGGTTCA AACGGCATTA CCCTAAACGC AGGCAGCATT 
GTGTTGTTGG GCAACTATAT CGGTGTGAAT CTTAGTGGTG CAGCTGCAGG CAATGCTAGA 
AGCGGTATCT ATATTGCTTC AACTTCTACG AACAATACCA TCGGCTCAAA TCCTAAAAGC 
ATCTCTGGTC TGTATTCCAA TGTGATCTCT GGCAATACTT TGCATGGTAT TCACATCGTA 
GGAAGCGCCG GCAATAAGAT TCAGGCTAAT GCGATTGGCA CTAACCTAGC AGGCACGGCC 
GCTATTTCCA ATAGAGGCAA CGGCATTCTG GTAACTTATT TTGCTGTAGA CAATTTAATC 
GGCGGTACGG CTTACTATAA TGCCGCTACA GGTTAA
 
Protein sequence
MLCLKSFRAL YLALTAVLLF GLVACGGGGG SSSSATSAAT PSVYYVVSNT NDSGAGSLRD 
AITSVNASSS SQYSGITFSV AGVITLKSDL PALTKKVLID GTTAPGYVAG NTTAAPVVAV 
NFDSAGSGFI FDSGSAGSGI TALSIISSGS NGITLNAGSI VLLGNYIGVN LSGAAAGNAR 
SGIYIASTST NNTIGSNPKS ISGLYSNVIS GNTLHGIHIV GSAGNKIQAN AIGTNLAGTA 
AISNRGNGIL VTYFAVDNLI GGTAYYNAAT G