Gene Pnec_1136 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnec_1136 
Symbol 
ID6183936 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolynucleobacter necessarius subsp. necessarius STIR1 
KingdomBacteria 
Replicon accessionNC_010531 
Strand- 
Start bp989443 
End bp990330 
Gene Length888 bp 
Protein Length295 aa 
Translation table11 
GC content43% 
IMG OID641671739 
ProductAsmA family protein 
Protein accessionYP_001797916 
Protein GI171463803 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones54 
Fosmid unclonability p-value0.0437231 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGCCCTTTA ATGTATTGCC GAATGCAAAC GGAGCGATCA ATGTCAATAT TGCTGAGCTT 
GGTGTTCCAG GGCAAGCTTC ATTGACAAAC TTTAAAACGA CGCTGCAATT TAAGAAAAAT 
AGCATTGATG TAAATGATTT GAGTTTTAAT GTTGGCAAGG GGGGTGCATT GGCTCAAATC 
TCTATAGCGG GCTTTGATAG TACTGCCCCC AAAATCTCAT TTAAGGGACT TGCGAAAGAC 
TTTAGCTTAG AGCAAATTAT TTCTTCTGCA GATTCAGGCG CCAAAGTTTC CGGGGGAGCT 
GCTCGTTTAG CTTGGAACTT ACAGGGAAGT GGTGTAAGTC CGCATCAACT AGTTAGCCAT 
GCTACAGGTG CAATCCAACT TTCGGTTGGC CAGGGAAAGT TAGATTCAAG TCTGATAGAT 
AAAGGCGGCG ATTTTTTGGT GACCTTGGTA GACACGATAA ACCCCCTCTA TAAAAAATCT 
AGTCTAACTA TTTTGGAATG CGCAGTTGCT TACTTGCCGG TAAATAATGG GTTGGTCACT 
ATTCAAGATT CAGTTGGGTT GGAGACGGAT CGACTCGATA TCACTCTATC AGGCAATATT 
AACCTTGAGA ACGAGGCCTT GAGCATCAAC ATTAATCCCA GAGAGAAATC TGGTTTGACT 
ACTGGAGTAG ATCTGGGGGG CTTGGTAAAA ATTGAAGGAA CTATACAAAA CTCAAAAACG 
GGCGTCAATA AAACCGGTGT CGTTACCAGT GCAGTATCCA TTGGTCTGGG GATTATCACT 
GGGGGTGCAA CGATCTTGGC TGAAAATACT AAATCAATGG CGACCAAGTC GCAGCCTTGT 
AAAACAGCGC TGCACTCTTG GTCGGATATC TATTCTGTAG GCAAATAA
 
Protein sequence
MPFNVLPNAN GAINVNIAEL GVPGQASLTN FKTTLQFKKN SIDVNDLSFN VGKGGALAQI 
SIAGFDSTAP KISFKGLAKD FSLEQIISSA DSGAKVSGGA ARLAWNLQGS GVSPHQLVSH 
ATGAIQLSVG QGKLDSSLID KGGDFLVTLV DTINPLYKKS SLTILECAVA YLPVNNGLVT 
IQDSVGLETD RLDITLSGNI NLENEALSIN INPREKSGLT TGVDLGGLVK IEGTIQNSKT 
GVNKTGVVTS AVSIGLGIIT GGATILAENT KSMATKSQPC KTALHSWSDI YSVGK