Gene Pnec_1134 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnec_1134 
Symbol 
ID6183692 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolynucleobacter necessarius subsp. necessarius STIR1 
KingdomBacteria 
Replicon accessionNC_010531 
Strand+ 
Start bp988817 
End bp989008 
Gene Length192 bp 
Protein Length63 aa 
Translation table11 
GC content42% 
IMG OID641671737 
ProductSlyX family protein 
Protein accessionYP_001797914 
Protein GI171463801 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value0.830125 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones58 
Fosmid unclonability p-value0.0936794 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCTGAAG AATACATCAC CAACCTCGAA ATCAAGCAGA GCTTTACAGA AGATCTCATC 
GAGAAACTTA ATGAGACAGT TTATAAACAG CAACAGCAAA TTGAATTCTT ATACCGCGAA 
TTAAAAGCCA TCAAAGAGCA AGCTAGCAGC GGTGGCGGCA GCCTGAAGGA TGAAATTCCT 
CCACACTACT AA
 
Protein sequence
MPEEYITNLE IKQSFTEDLI EKLNETVYKQ QQQIEFLYRE LKAIKEQASS GGGSLKDEIP 
PHY