| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnec_1110 |
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| Symbol | |
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| ID | 6184018 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polynucleobacter necessarius subsp. necessarius STIR1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010531 |
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| Strand | - |
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| Start bp | 969962 |
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| End bp | 971203 |
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| Gene Length | 1242 bp |
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| Protein Length | 413 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 641671720 |
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| Product | BNR/Asp-box repeat protein |
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| Protein accession | YP_001797897 |
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| Protein GI | 171463784 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG4692] Predicted neuraminidase (sialidase) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 36 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 70 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGTCGTA TTGTTGCCCT GTGTTTTTTA TTGCTCGCCG CAGTGATCGG GTTTCTGCAT
ATTGATAGTT GTCCGAGTTG GGCACCTTTT GCTTTATCCT CTGCACTCCA AGCAGAGGAT
CAGGGTGATG GGTTGGTAGA AATCAAGCCT AAAGCTTTGT CCAAGGCAAT TATTCCAGCA
TCACAAACCA ATTGGCTCCC CGATACAGGT GCTGCGTCAG TTCATGCGGC CTCTATGATT
GCTTTAAAAG ATGGCGCAGT TCGGGTGTTT TGGTTTGCAG GCAGTCGCGA GGGCGCTGCT
GATGTGGCGA TCTATAACTC TGTATACGAC CCCCATTCAA CAAATTGGAG TGCACCTACC
GTTGTAATGG ACCGCGTAAG CGCTGAGAAG GGTTTGTTGC GTTACATTGC CAAATTAGGC
AATCCTGTAC CCACTAGATT GGTTGATGGA AGGTTGCAAT TATTTTTCGT AACGGTATCG
ATTGGCGGAT GGGCGGGTAG CTCGATTTCT GCAATCACTT CGGATGATGA GGGTTTAACT
TGGAGTAGTC CTCAGCGTTT GATCAGTTCG CCTTTATTGA ATCTGAGTAC TCTGGTGAAG
TCACCTGGCG TTATGTTTGT TGATGGATTA ATGGGTATGC CCGCCTATCA TGAGTGGGTA
GGGCGCTTTG GTGAATTCTT GAGGGTAGAT GCGGGCCGAG TCATTGATAA ACGACGTATG
AGCTCAGGGC GCGGCGCAAT TCAGCCGTTA GTTTTTGTCA ATGATGCCCA AGACGCTAGT
GCTTTTTTTC GGCAAACGCG CAGTGCAGGT TTGCCAAAAC AAATTCCAGT TAGCTACACC
CAAAATGCAG GTCAAAACTG GCATCAGTCT GAAGATTTAG CAATTGCCAA CCCAAATTCT
GCTGTAGCAG GCGTGATTCT TAAGAGTGGC ACCCGCATAT TGGTTTTAAA TGATATTGAG
TATGGTCGTC ATCGCCTGGT TTTAATGATG AGCAGTCCTA AAAATGGACA ATGGCAAACC
GTGGAGGTAT TAGAGGATGA TGAAGCTCTG CCTGATATCC AGCGTAAAGA ATTTTCCTAT
CCGTACTTGA TTACCGTTGA TGGTGAGGAT GCGCATTTGG TATATACCTG GGATCGAAAA
AAGATTCGTC ATCGCTATTT TTCAAGCGCT TGGTTAAAGC ACGCATTTAG TAAGGTACAG
ATACAAGCAG CGGATGTACC AAGTCAGGAG GCTCAGCAAT GA
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| Protein sequence | MSRIVALCFL LLAAVIGFLH IDSCPSWAPF ALSSALQAED QGDGLVEIKP KALSKAIIPA
SQTNWLPDTG AASVHAASMI ALKDGAVRVF WFAGSREGAA DVAIYNSVYD PHSTNWSAPT
VVMDRVSAEK GLLRYIAKLG NPVPTRLVDG RLQLFFVTVS IGGWAGSSIS AITSDDEGLT
WSSPQRLISS PLLNLSTLVK SPGVMFVDGL MGMPAYHEWV GRFGEFLRVD AGRVIDKRRM
SSGRGAIQPL VFVNDAQDAS AFFRQTRSAG LPKQIPVSYT QNAGQNWHQS EDLAIANPNS
AVAGVILKSG TRILVLNDIE YGRHRLVLMM SSPKNGQWQT VEVLEDDEAL PDIQRKEFSY
PYLITVDGED AHLVYTWDRK KIRHRYFSSA WLKHAFSKVQ IQAADVPSQE AQQ
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