| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnec_0990 |
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| Symbol | |
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| ID | 6182991 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polynucleobacter necessarius subsp. necessarius STIR1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010531 |
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| Strand | - |
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| Start bp | 859332 |
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| End bp | 860480 |
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| Gene Length | 1149 bp |
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| Protein Length | 382 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 641671609 |
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| Product | NlpBDapX family lipoprotein |
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| Protein accession | YP_001797788 |
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| Protein GI | 171463675 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG3317] Uncharacterized lipoprotein |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.000475285 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 71 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATGAATT TGCACCAAAT ATTGCGCCGA TTTTTGCCGG CTTTGGCGGT GATTTGTATC
GCATCTACTG CATTAACAGC ATGTAAATCT GTTACGAGTA ACGATACCGT TGACTATAAG
AGTGCTGGCG CTGTTCGCGG TCCTAATCTA TCTTATCCCC CTGATTTGAT TACTGCTCAG
GCTGATCGTC GCTATATCGT TCAGGATGGT ACGGCCACTA TGTCTGAATA CAATACTGCT
GTTAAGAAAT CGGTGCAGAT GAGAAGTAAC GTGATGACCG GCATTTCTGG TATGCGTATT
GCACGTGATG GCGAGCGTCG TTGGTTGGTT GTAGAAAAAC CTGCAACTGA GTTGTATCCA
CAGGTAAAAG ATTTTTGGCA AGAAAATGGT TTCTTGTTGG TGATTGATTC ACCAACAACC
GGCATCATGG AAACCGACTG GGCTGAGAAT CGCGCGAAAA TTGCTCAGGA TTGGATTCGT
TCAACCATTG GCGGAGCTTT GGACTCTATC TATGACACAG GTGAGCGCGA TAAATACAAA
ACACGTTTAG AGGTTGTTAA GCCTGGCGAG ACTGAAATCT ATATTACTCA GCGCGGCGCC
ATTGAAAAAT GCGTAACTGA TAATATGGGC CAATGTATCT CCACGATATG GACCGCTCGT
CCTAACGATC CTGAATTAGA AGCTGCATTC TTGGCTCGCT TGATGGAGCA TTTGGGTATG
ACCCAGGAGC AAGCTAAGGC AATGGTTGCG GCGCCACTTG GCCCTAAAAC CCCCAAAGCT
AAGTTTGTGC AAGACGGCAC GAATCAAGCT CATATTGAGT TGAGTACAGG TTTTGATCGC
TCTTGGCGTG ATATTGGTTT AGCGCTTGAT CGCTCAAACT TTACCGTTGA AGATCGCAAT
CGCTCCACTG GTGTTTACTA TGTGCGCTAC GTTAATCCAA AGGATGTTGG TGATTCCAAA
GGAATTTTCT CCAATCTCTT TAGTAGTAAA GATGACGCCA GCTTGAAGGC TAAAAAATAT
CAGGTTGTCG TAAAGAGTAC TGGCGAGAAT TCTGCTAGCG TTTATGTGCA AGATGCTGAA
GGTAAGCCGG AAAATACGCC TGCTGGATTC CAGTTGCTGA CAGTATTGAC CGATCAGCTT
ACAAAGTAA
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| Protein sequence | MMNLHQILRR FLPALAVICI ASTALTACKS VTSNDTVDYK SAGAVRGPNL SYPPDLITAQ
ADRRYIVQDG TATMSEYNTA VKKSVQMRSN VMTGISGMRI ARDGERRWLV VEKPATELYP
QVKDFWQENG FLLVIDSPTT GIMETDWAEN RAKIAQDWIR STIGGALDSI YDTGERDKYK
TRLEVVKPGE TEIYITQRGA IEKCVTDNMG QCISTIWTAR PNDPELEAAF LARLMEHLGM
TQEQAKAMVA APLGPKTPKA KFVQDGTNQA HIELSTGFDR SWRDIGLALD RSNFTVEDRN
RSTGVYYVRY VNPKDVGDSK GIFSNLFSSK DDASLKAKKY QVVVKSTGEN SASVYVQDAE
GKPENTPAGF QLLTVLTDQL TK
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