| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnec_0958 |
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| Symbol | |
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| ID | 6182921 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polynucleobacter necessarius subsp. necessarius STIR1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010531 |
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| Strand | - |
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| Start bp | 831590 |
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| End bp | 832564 |
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| Gene Length | 975 bp |
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| Protein Length | 324 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 641671580 |
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| Product | 2-nitropropane dioxygenase NPD |
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| Protein accession | YP_001797760 |
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| Protein GI | 171463647 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG2070] Dioxygenases related to 2-nitropropane dioxygenase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 79 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGTCATA TCCCAAAAAT ACTGCAGGGC CTACGTTTGC CGGTTATCTC GGCACCCATG
TTCACCGTTA GCTATCCAGA GCTTGTTCTT GCCCAGTGCA AAGCTGGGAT TGTGGGCTCC
TTTCCCGCTT TAAATGCCAG GCCGCAAGAA ATGTTGGATA ACTGGCTGAC TCAAATTCAA
AGTGAGTTGG CTGACTTTCA GAAAATTAAT CCTGAATCCA AGGTTGGCCC TTTAGCGGTC
AATCAAATCG TACACGTCTC CAATGCGCGC CTTGAGCAGG ATATGTGTTC ATGTGTAAAA
CATCATATAC CGATTTATAT TACTAGCCTT CGAGCGCCTG TTAAAGAAAT AGTTGACGCG
GTTCACAGTT ATGGTGGCAT AGTCTTGCAC GATGTGATTA GTATTCGCCA TGCTGAAAAA
GCATTAGAGG CGGGTGTAGA TGGATTGATC TTGGTAGCTG CTGGTGCAGG TGGACATGCT
GGTGCTTTAT CTCCATTCGC ACTTGTAGGT GAGGTTAGAA AAATATTTCA AGGACCTCTA
GTGTTGTCTG GAGCAATTTC TACTGGTGAC GCAGTATTAG CTTCGCAAGC AATGGGCGCT
GACTTTGCAT ATATGGGAAC CAGATTTATT GCCAGTCAAG AAGCGCATGC AAGCGAGCAA
TATAAGCAAG CGATTGTTAC GGCACAAGCA GCCGATATTG TTTATACCGA TCACTTTACG
GGTATACATG GAAACTACAT TAAGCAAAGC ATCCTCAATG CCGGCCTTGA TCCTGCTAAC
TTGCCGGATG GTGATCCGCA AGCATTTGCT AAGCTTTCTC AAGCAGGTAA GGATGGGGCG
GGGGCGAAAG CTTGGAAGGA TATTTGGGGT GCTGGCCAGG GTGTAGGGCT TATTGACGGT
GTTCCTACCG TAGGGCAAAT CGTTGATCAG CTGGTCCAAG AGTATCAGAC GGCAAAGAAG
CGCTTATTTG CCTAA
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| Protein sequence | MSHIPKILQG LRLPVISAPM FTVSYPELVL AQCKAGIVGS FPALNARPQE MLDNWLTQIQ
SELADFQKIN PESKVGPLAV NQIVHVSNAR LEQDMCSCVK HHIPIYITSL RAPVKEIVDA
VHSYGGIVLH DVISIRHAEK ALEAGVDGLI LVAAGAGGHA GALSPFALVG EVRKIFQGPL
VLSGAISTGD AVLASQAMGA DFAYMGTRFI ASQEAHASEQ YKQAIVTAQA ADIVYTDHFT
GIHGNYIKQS ILNAGLDPAN LPDGDPQAFA KLSQAGKDGA GAKAWKDIWG AGQGVGLIDG
VPTVGQIVDQ LVQEYQTAKK RLFA
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