Gene Pnec_0934 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnec_0934 
Symbol 
ID6184272 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolynucleobacter necessarius subsp. necessarius STIR1 
KingdomBacteria 
Replicon accessionNC_010531 
Strand
Start bp811592 
End bp811945 
Gene Length354 bp 
Protein Length117 aa 
Translation table11 
GC content43% 
IMG OID641671564 
Productcytochrome c class I 
Protein accessionYP_001797746 
Protein GI171463633 
COG category[C] Energy production and conversion 
COG ID[COG2863] Cytochrome c553 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones38 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones82 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAATTCG CCCTAATTAC TGCAGTTTTG CTATCCAGCA TCGGTTTGGT AAACGTAGCA 
AATGCTGCTA ATAAAGACAA AGGTCAGGCA TTGGTTGAGA AGGCGAATTG CGCCTCTTGT
CATGGTGCCG GTCTGAATGC TCCAATCCTG CCAGCTTATC CAAAATTAGC TGGTCAGTAC
TCTGACTATC TATACTACGC TTTAAAGGCC TACAAAGTAG GAAATGGCAA TGCACAGTTC
GGTCGCAATA ACGCGGTTAT GGGCTTACAA GTACAAAACT TTAGCGATGC TGATTTGCAA
GATATCGCCG CTTATATTTC CTCATTGCCG GGAAACTTTG TGGTTAAAAA GTAA
 
Protein sequence
MKFALITAVL LSSIGLVNVA NAANKDKGQA LVEKANCASC HGAGLNAPIL PAYPKLAGQY 
SDYLYYALKA YKVGNGNAQF GRNNAVMGLQ VQNFSDADLQ DIAAYISSLP GNFVVKK