| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnec_0917 |
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| Symbol | |
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| ID | 6184181 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polynucleobacter necessarius subsp. necessarius STIR1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010531 |
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| Strand | - |
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| Start bp | 793881 |
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| End bp | 794492 |
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| Gene Length | 612 bp |
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| Protein Length | 203 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 641671547 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_001797729 |
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| Protein GI | 171463616 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 30 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 79 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | TTGACTTTAT TGCTTCAGAG GGCAACGTAT CCGACTGGGG TAGTACTGTT GCTGCCTTTG
AAAAGGTTAA AGCTGAACTT TGAAAAGGTT AAAGCTGAAG TTGGCCGTGT AGATGTACTG
GCAAATAACG CCGGCATTAC ACGTGACAGC GTATTCCGCA AAATGATTCC AGATGCATGG
AAAGCGGTTA TAGATGCAGA TGCCAATCTA AACTCCTTGT TCAATGTAAC CAAGCAAGTG
ATTGATGGCA TGGTTGAAAA CAACTGGGGT CGCATTATCA ATATTTCTTC AGTGAACGGT
CAAAAAGGTC AATTTGGTCA AGCAAATTAT TCAACCGCTA AGGCGGATCT GCATGATTTT
ACTATGACTT TAGCGCAAGA AGTTGCTACT AAAGGCGTTA CCGTGAATAC CGTATCCCCG
GGTTATATCG GTACAGATAT GGTCAAGGCA ATCCGCGAGG ATGTTTTAGA AAAGATTGTT
TCTGGCATTC TGGTAAAGCG TTTAGGCACT CCTGATGAAA TCGCTTCAAT CTGCTGTTGG
ATTGCTTCAG ATGATGGCGG CTATGCAACT GGTGCTGACT TCTCCTTGAA TGGCGGTATT
CATATTGGAT AA
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| Protein sequence | MTLLLQRATY PTGVVLLLPL KRLKLNFEKV KAEVGRVDVL ANNAGITRDS VFRKMIPDAW
KAVIDADANL NSLFNVTKQV IDGMVENNWG RIINISSVNG QKGQFGQANY STAKADLHDF
TMTLAQEVAT KGVTVNTVSP GYIGTDMVKA IREDVLEKIV SGILVKRLGT PDEIASICCW
IASDDGGYAT GADFSLNGGI HIG
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