| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnec_0884 |
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| Symbol | |
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| ID | 6184533 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polynucleobacter necessarius subsp. necessarius STIR1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010531 |
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| Strand | + |
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| Start bp | 755985 |
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| End bp | 757106 |
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| Gene Length | 1122 bp |
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| Protein Length | 373 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 641671510 |
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| Product | DNA-directed DNA polymerase |
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| Protein accession | YP_001797697 |
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| Protein GI | 171463584 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG2812] DNA polymerase III, gamma/tau subunits |
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| TIGRFAM ID | [TIGR00678] DNA polymerase III, delta' subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 0.772568 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 68 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGATTCAAA ATACTCAATT AGCTCCCTGG CATCAACCCC TCTGGGAGGG CTTAGATTTT
GACAACTTCC CTAATGCCAT ATTGATACAT GGACAGTCTG GCATAGGTAA ATTTACTTTT
TCAGTTGAAC TTGCTAAAGT ACTGCTCTGC GAGAATGCAG ATGCCACTAC CAAGCCTTGC
AATAAATGTG AAGCATGTCA TTGGTTTGAT ACTGGCAATC ATCCTGACTT TATTTCGCTT
GTGCCTGAAA CTCATCGTAA GCTATTGCCA CATGCTGACT ATGATGGCGA TGATTCACCG
AAAAAAGCAA AAGCAACACG CGATGATGAA AGCGAGTCGA GCGAAAAGAA AGAGAAGAAA
AATATCTCTA TAGAGGAAAC TCGACATGCA ATTGAAAATC TATCCATCGG ATCTCATCGC
GGCGGCAATC GCGTGATCTT GATTTACCCC TTAGAAATGC TACGCTCAGA TTCTGCAAAT
ACATTACTTA AGTCTTTAGA GGAGCCTCCT GAAAAGACCA TTTTTATATT GATAACCGAT
AGAGTAGATC GTGTGTTACC AACTATTCGT TCACGCTGTC GCCTATTAAC TGTCCCTCGT
CCAAATCGTG AGCAAGGCCT AGCCTGGTTA AATGTTCAGT TAAATCAAGT TACGGGATTA
AAAGCAAGCG CTGCAGATAT AGAGATCATC TACGATGAGC AGGGTGGGGC GCCTTACCTA
GTTCTAAATT CATTAATCGC AAGACACAAT AAAGACGATA AGGATGAGCT AACTGCATCC
ATCCAGGCTT CTCGCTACTT ACTCCAATCT ATGGCTCAGG GGGTCAGACT CAACTGGCTA
GATGCTGCTG AGAAAACTCA TAAAGCGCAA TATGGATTTC TTTTGGCAAC GATGCAGCGC
TGGGTTTCAG ATCTTCAATT AGTGGCGCAA GGTGGAACTT CACGTTATTA CCCAAAGCAT
TTGGCTACTC TTCAAGAACT CTCAAAAATG GTGAGTATTC AGAAACTACA TCACTTTTGG
AAATCACTGG TACAAGCTCG ACGCCATGAA AATCACCCTC TTGCCAATAG AATTCAAATA
GAGGCACTGC TTTCGCAATA TCAGCAGATA TTTAGCCCAT AA
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| Protein sequence | MIQNTQLAPW HQPLWEGLDF DNFPNAILIH GQSGIGKFTF SVELAKVLLC ENADATTKPC
NKCEACHWFD TGNHPDFISL VPETHRKLLP HADYDGDDSP KKAKATRDDE SESSEKKEKK
NISIEETRHA IENLSIGSHR GGNRVILIYP LEMLRSDSAN TLLKSLEEPP EKTIFILITD
RVDRVLPTIR SRCRLLTVPR PNREQGLAWL NVQLNQVTGL KASAADIEII YDEQGGAPYL
VLNSLIARHN KDDKDELTAS IQASRYLLQS MAQGVRLNWL DAAEKTHKAQ YGFLLATMQR
WVSDLQLVAQ GGTSRYYPKH LATLQELSKM VSIQKLHHFW KSLVQARRHE NHPLANRIQI
EALLSQYQQI FSP
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