| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnec_0799 |
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| Symbol | |
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| ID | 6183989 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polynucleobacter necessarius subsp. necessarius STIR1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010531 |
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| Strand | + |
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| Start bp | 689040 |
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| End bp | 689690 |
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| Gene Length | 651 bp |
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| Protein Length | 216 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 641671431 |
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| Product | protein of unknown function DUF140 |
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| Protein accession | YP_001797621 |
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| Protein GI | 171463508 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG0767] ABC-type transport system involved in resistance to organic solvents, permease component |
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| TIGRFAM ID | [TIGR00056] conserved hypothetical integral membrane protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 67 |
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| Fosmid unclonability p-value | 0.745929 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGGGGCGAC TTTATCAATG CGGCAGTGGA GGCGGGCATA GCGGCATTGC CGATCGTTGG
CTTGGTAGCC TTTTAATTGG CGTGATCTTA TCCTTCCAAG CGGCTATTGG CATGCAGCAA
TTTGGCGCCG TATCTTTCGT TGGCCCCTTG GCTGCTTTAG ACATTGTGCG AGAGATGGGT
CCGATAATTA CAGCTATTTT GCTGGCCGGC CGGTCATCCG CAGCATTTGC TGTTGAGATT
GGCACTATGA CTGTTAATAG TGAGGTCGAT GCGCTGGTAT CGGGCGGCTA CTTTTTAGTT
GTATCGCGCA TCCTAGCCGG CATTCTTGTG GCGCCAATTT TGACCTTGTT CGCCGACATA
GTCAGCATTT TTTCTTCTAT GCTAACCATG TTGATTTACG GCATTCCGTT TGTAAATTTT
TATAACGGAA TGTTGTCCGC TGTTGATGTT GAAGATATTT TGTCTGGATT GCTCAAAGCA
ACGCTCTTTG GTGTTGTTAT TTCCGCTATG GGATGTTTGC GTGGAATGCA AACAGGAACT
GGCGCTGCAG CTGTTGGCAT CTCTGCAACC CGCGCCGTAG TGAGTAGTAT TGTCATGATC
GTTATCGTTG ACGGTATCTT TGCTTTTATC TCCTATAAGA CAGGCTTCTG A
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| Protein sequence | MGRLYQCGSG GGHSGIADRW LGSLLIGVIL SFQAAIGMQQ FGAVSFVGPL AALDIVREMG
PIITAILLAG RSSAAFAVEI GTMTVNSEVD ALVSGGYFLV VSRILAGILV APILTLFADI
VSIFSSMLTM LIYGIPFVNF YNGMLSAVDV EDILSGLLKA TLFGVVISAM GCLRGMQTGT
GAAAVGISAT RAVVSSIVMI VIVDGIFAFI SYKTGF
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