Gene Pnec_0794 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnec_0794 
Symbol 
ID6183094 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolynucleobacter necessarius subsp. necessarius STIR1 
KingdomBacteria 
Replicon accessionNC_010531 
Strand
Start bp685264 
End bp685467 
Gene Length204 bp 
Protein Length67 aa 
Translation table11 
GC content49% 
IMG OID641671425 
ProductDNA-directed RNA polymerase subunit omega 
Protein accessionYP_001797616 
Protein GI171463503 
COG category[K] Transcription 
COG ID[COG1758] DNA-directed RNA polymerase, subunit K/omega 
TIGRFAM ID[TIGR00690] DNA-directed RNA polymerase, omega subunit 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value0.900831 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones67 
Fosmid unclonability p-value0.654875 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCCGTA TTACTGTAGA AGATTGCCTT AAAACGATTC CAAACCGATT TGAATTGGTT 
TTGGCTGCTA CCTATCGTGC ACGCCAATTG GTGCAAGGTC ACTCCCCACG TGTTGAGTCC
AGAGACAAAG CTACTGTCGT TGCATTGCGC GAAGTTGCTG CTGGTGTAAC CGACCGTGAC
ATGTTGACCA AAGTGCCTCT GTAA
 
Protein sequence
MARITVEDCL KTIPNRFELV LAATYRARQL VQGHSPRVES RDKATVVALR EVAAGVTDRD 
MLTKVPL