| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnec_0733 |
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| Symbol | |
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| ID | 6184337 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polynucleobacter necessarius subsp. necessarius STIR1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010531 |
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| Strand | + |
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| Start bp | 632419 |
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| End bp | 634134 |
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| Gene Length | 1716 bp |
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| Protein Length | 571 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 641671378 |
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| Product | Fimbrial assembly family protein |
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| Protein accession | YP_001797573 |
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| Protein GI | 171463460 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG4972] Tfp pilus assembly protein, ATPase PilM |
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| TIGRFAM ID | [TIGR01175] type IV pilus assembly protein PilM |
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Plasmid Coverage information |
| Num covering plasmid clones | 31 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 67 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAATAATC CTTTTCAACC GCTATTAAAG GCATTTATTG ATGCCCTGAG TAAGTATTCC
ATCAAGCAAG AGGATGTGGT TGGGGTAGAC ATTACGCCAA ATTACATAAG GGTTGCGCAG
CTTAGCGAAA ACCCAGATGG TTGGTTGCTT GAAAAGATGG GTTTTAAGCA GGTTGCCGAT
GGTGCAACTC TTGATGATGT CCGTGATTCT CAGGATGATT ATGTCCAGAA GCTCAGAGAA
TTGATTATTA CCGCTAATTT AGAAACTGCC AATGCGGCCA TTTCAATTCC TATTACAAGT
GCGATTGTTC GCACTGTCAC CATGCCATTA ATGAGTGATG AGGAAATTGA AAGCACCATT
CAATATGACT CACTTTGGAA CAATATTCTT CAGCTAGAAG AAAAGCTCGA GGAATATTCG
ATTTTCTGGC AAGTCATTCG TCGCAACACT GCTGAAAACA CCATGGAACT ACTTTTTGTA
GCATCCAAGT TGTCTGAAAT CAATCAATAC GTGCAAATTG CGACTCGTGC CGGCTTAAAT
TCCGTGGTGG TTGACGTGCG CTGCTTTGCC ATTCGAAATG CGCTGAAGGC GCAAAAGGGA
GGGGCGCAGG GTACAACCGC TCTGATTGAG TTTGGGCCCA ACGAAAACTA TGTTTTGATT
GTTACTGACG ATACCCCTTT CATATATGAC ATATATATCT CGGAAGCAGA TTGTGCATTG
ATTGAATCTG GACAGCTTGA GGGTGAGCAG GGCGATCGTT TGTATGATTG TTTTGCGGGG
CAGGTACTTC AAGCTTTTAG AGCCTACGAA ATTAAGCTAG GCAAAAAACT CATCGATCAA
GTGCTCTTAG TTTCACCCAT TCAGGATAAA AATGAGTTGC TGGCTCAAAT GCGTCGAGTT
TTAGACGGGT ATCACATCGA CTTATTTGAC CCACTTTCTG ACTTGCAAAT CCCCAGTAAT
TTAAATGAAG TCATTGAGTC AGAGTCTAAT CCATCCGTGT TTACCTCTGC CATTGGATTG
GCGGTGCGCA AGGTCGATAT ATTTGGCTAC TACAAATATG TCACCGGCGT AAATAATGTT
AACTTGCTGC CTAACCGGGA TGTTGTGAGG CAGATAGAGC GCAAAAAAAT ACTATCTAAA
GTCTGGATGA TTACTAGCGC ATTGGTTGTA GCTGTGTTTA TTGTTGACAC CATATTGTAC
CAGTATTTCT TTAACAATAC GCTATCGAAT CAATATCAAA CTGCAGTTCA GATTGAGAAG
CAGGTCCAAT TAAAAGAGGC GTCGCTTGCT GCGCTGAAGG CGCAAAAGGC AAAATATTCA
CAGATGTTAG ATGCCAGCAA GGAATTTAAG TCAGATCAGG CCTCTAACTA TCAGCTACTG
AGCGCTGTCA ATCAAGCAGT GCCAGGTGGA GTGTGGTTTA GCAATATAGA TTTCACAAGT
CCCAATAGTC TAGTCATTAA AGGTGATGCT TCGAGTGATC AGGCGATAGT CAGCTTTATT
GAGCGCTTGC AAAAACTACC GATGATTGAA AAGGCCTCCT TGCAGAACAT GACTCTGAGT
ACTGGCCCAA ACCAACGAAA GAGTGATGGC GCGAAACAGT TTGAAGTGCG CTGCGTGGTT
ACAACCAACA TGGCCCCCGC TAGCTCACCC CAATCTGCGA CACCCGTGTC AAAGAACCAA
AACCCTCAGG CAAATGCGCC TACTACTTAT TTATAA
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| Protein sequence | MNNPFQPLLK AFIDALSKYS IKQEDVVGVD ITPNYIRVAQ LSENPDGWLL EKMGFKQVAD
GATLDDVRDS QDDYVQKLRE LIITANLETA NAAISIPITS AIVRTVTMPL MSDEEIESTI
QYDSLWNNIL QLEEKLEEYS IFWQVIRRNT AENTMELLFV ASKLSEINQY VQIATRAGLN
SVVVDVRCFA IRNALKAQKG GAQGTTALIE FGPNENYVLI VTDDTPFIYD IYISEADCAL
IESGQLEGEQ GDRLYDCFAG QVLQAFRAYE IKLGKKLIDQ VLLVSPIQDK NELLAQMRRV
LDGYHIDLFD PLSDLQIPSN LNEVIESESN PSVFTSAIGL AVRKVDIFGY YKYVTGVNNV
NLLPNRDVVR QIERKKILSK VWMITSALVV AVFIVDTILY QYFFNNTLSN QYQTAVQIEK
QVQLKEASLA ALKAQKAKYS QMLDASKEFK SDQASNYQLL SAVNQAVPGG VWFSNIDFTS
PNSLVIKGDA SSDQAIVSFI ERLQKLPMIE KASLQNMTLS TGPNQRKSDG AKQFEVRCVV
TTNMAPASSP QSATPVSKNQ NPQANAPTTY L
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