Gene Pnec_0716 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnec_0716 
Symbol 
ID6184103 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolynucleobacter necessarius subsp. necessarius STIR1 
KingdomBacteria 
Replicon accessionNC_010531 
Strand
Start bp622973 
End bp623332 
Gene Length360 bp 
Protein Length119 aa 
Translation table11 
GC content44% 
IMG OID641671362 
Producthistidine kinase 
Protein accessionYP_001797557 
Protein GI171463444 
COG category[T] Signal transduction mechanisms 
COG ID[COG4191] Signal transduction histidine kinase regulating C4-dicarboxylate transport system 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones36 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones68 
Fosmid unclonability p-value0.856156 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACAATG AGCCAGGGCT TGAGTGGAAT GGTGACCGAA GCAAGATTAC TCAGATCTTA 
CTCAATCTCA TTATGAACGC CGAGGAATCA TTAATAGCCA GTGCAAATCG GCCTAAAACA
CTGAAAATCT CAAGTTTTCA CATTAAAGAT AATGGCATCC AAATTGGGGT GGCTGACAAT
GGATCTGGTA TCGAGCCCGA TGTGATGAAT AAGCTATTTA GCTACGGATT TACCACTAAG
CAATTTGGAC ACGGCCTAGG ACTACACGCA AGCGGCATAG CTGCCAATGA AATGAATGGC
ACACTGATAC TCACCCTGCC CCATCAAGAG CTTTCCTCTT TAATTCAAAA GCATGCCTAA
 
Protein sequence
MNNEPGLEWN GDRSKITQIL LNLIMNAEES LIASANRPKT LKISSFHIKD NGIQIGVADN 
GSGIEPDVMN KLFSYGFTTK QFGHGLGLHA SGIAANEMNG TLILTLPHQE LSSLIQKHA