Gene Pnec_0681 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnec_0681 
Symbol 
ID6183386 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolynucleobacter necessarius subsp. necessarius STIR1 
KingdomBacteria 
Replicon accessionNC_010531 
Strand- 
Start bp590387 
End bp590974 
Gene Length588 bp 
Protein Length195 aa 
Translation table11 
GC content46% 
IMG OID641671335 
Productamino acid permease-associated region 
Protein accessionYP_001797531 
Protein GI171463418 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones71 
Fosmid unclonability p-value1 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGGGCACTG CGAGCGCCCA CGCCGGATCT CATATTCCCA TAGCATTTTT ACTAGGCGCA 
ATTGCCGCCT CATTTTCCGT CTATTCCTAT GCCAAATTAG GCGCTACATT TCCAAGTAGC 
GGTGGGGCTG CTACGTTTAC AGTGATGAGT TTTGGGCCTG GCATTATTTC TGGTGGGCTC 
AATACATTTC AATTCATAGC CTATCTCATT GCCGCCGCAC TTTATGCTGC CGGCTTTTCT 
GAATACGCTA ATACCTTGCT TGGCGGAAAT TTATCTCCTG TAGAGATAAA GCTAATTAGT 
GCTGGCATAG TTATTTTTTG TGCCGGCATT AAATTACTGG GCACTAGCTT TGTTGGCAAG 
GCAGAGGCAC TAGCAATTGG CTTTGTGACG ATCGCGCTTT TGCTCTTTTC GGCGGATGGC 
ATTCATGTTG CTGACATTGG CGCATTTCAG CCATCAAGCT GGTCAATCAA TGGCATTGCT 
ATTGCCACTG GTATTTTGTA CATCAACTAT CAAGGCTTTG GTGTAGCTAC CAACTCCTCT 
AATACCATGC AAAACCCCGG AAAGAGCTAC CACTTGCGAT GTTTTTAG
 
Protein sequence
MGTASAHAGS HIPIAFLLGA IAASFSVYSY AKLGATFPSS GGAATFTVMS FGPGIISGGL 
NTFQFIAYLI AAALYAAGFS EYANTLLGGN LSPVEIKLIS AGIVIFCAGI KLLGTSFVGK 
AEALAIGFVT IALLLFSADG IHVADIGAFQ PSSWSINGIA IATGILYINY QGFGVATNSS 
NTMQNPGKSY HLRCF