| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnec_0648 |
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| Symbol | |
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| ID | 6184417 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polynucleobacter necessarius subsp. necessarius STIR1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010531 |
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| Strand | + |
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| Start bp | 563015 |
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| End bp | 564001 |
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| Gene Length | 987 bp |
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| Protein Length | 328 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 641671311 |
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| Product | outer membrane efflux protein |
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| Protein accession | YP_001797507 |
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| Protein GI | 171463394 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1538] Outer membrane protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 38 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 76 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGTTGATTC TCGGCAAATA TAAAGCTTGC GATGTAAAAC CCCTCAAAAG CATGGCTCCA
TTTAATGCAC CAGCTAATCC GCAGGTTGGG TTGGTATGGT CAGGCATGCC AGTGAATTCT
CCATTTGCCT TGGGTGGAGC GAATGCGCCA TCTCAGCAAT ACCCTGGGGG TATTAGTAGC
AATAATGCTA TTTCAGTTGC ACAACCTTTT CAGTTCCCCG GTAAGAAGAG TCTTGCTGCT
GATATTGCTG ACACCAATGC TGAAGCCTTG CTAGCAAGCT CAGAATCCAC CTTTTTGCAG
TTGGGTGCAC AGCTCTCAAC CCTGTACTAC AGCGCCTTGT CATCACAAAA GCAATTGGCA
GTCTTAAAAG AGACGGTCAT TCGTCTAGAG ATGATCAAGA ATGTGACTAA GGCGCGTTAT
GCCAATAACA CTGTGGCGTA TGTTGAGTAC TTGAATGCTC AGGTGGCGCA AAGCACAGCT
CAAGCAGATC AATTCAACGT AGAGCGTCAG CTTAATGTCG CTTTGCACAA CATCAACACC
TTGGTTGGTC GCCACTCACG CGATAAGCTC ATTTTACGCG GCGATGTGCG TCGTGCGATT
TCCAGCGTGC CAACCTTAAT TGAGTTAGAG GATTGCGCCG AGAGCAGTCA TCCTTCTTTA
AAAAGTTCAG CATTGCAATT AGAGGCGGCC CGCAAGGGGG TTGATTTAGC GAAGAAGGCT
TCTTTGCCAG ACTTCCAAAT AATCGGCTCG TCCTACACTC CGCGCGGCCC ATTCTCTACG
AATAATGGCG CATTGTTTTA TCGGTTTGAG TTAGATCTAA TTATTCCTTT GTACTTCTTT
ACCAAAGAAA AGTACGGTGT TGAGCAGGCA CAACGCAATC AAACAGCAGC CGAAGCTGGC
AACATTTCTA ATCGTCAGCA AATCGTATTA GCTGTCAATA CTGCCTATGC TGTTTATGAG
CAAGCCAAGA ACAAACCCAG TTTTTAA
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| Protein sequence | MLILGKYKAC DVKPLKSMAP FNAPANPQVG LVWSGMPVNS PFALGGANAP SQQYPGGISS
NNAISVAQPF QFPGKKSLAA DIADTNAEAL LASSESTFLQ LGAQLSTLYY SALSSQKQLA
VLKETVIRLE MIKNVTKARY ANNTVAYVEY LNAQVAQSTA QADQFNVERQ LNVALHNINT
LVGRHSRDKL ILRGDVRRAI SSVPTLIELE DCAESSHPSL KSSALQLEAA RKGVDLAKKA
SLPDFQIIGS SYTPRGPFST NNGALFYRFE LDLIIPLYFF TKEKYGVEQA QRNQTAAEAG
NISNRQQIVL AVNTAYAVYE QAKNKPSF
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