| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnec_0642 |
|---|
| Symbol | |
|---|
| ID | 6183575 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Polynucleobacter necessarius subsp. necessarius STIR1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010531 |
|---|
| Strand | - |
|---|
| Start bp | 557347 |
|---|
| End bp | 557634 |
|---|
| Gene Length | 288 bp |
|---|
| Protein Length | 95 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 42% |
|---|
| IMG OID | 641671305 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001797501 |
|---|
| Protein GI | 171463388 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG3514] Uncharacterized protein conserved in bacteria |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 26 |
|---|
| Plasmid unclonability p-value | 0.343821 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 77 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCAGATC CTGACAATAG GCCATTCACG GATGAAGAGT GGGAGAAAGT CAAGCCTACG
CTGGTTCGTG GTCGCGGCAG ACCCCTGGGC AGTGGAGCTA AAGAGCAGGT TACTCTAAGA
ATTGATAAAG AAACATTGGA TTTTTATAAA TCCAAAGGCG AAGGTTGGCA AACTTTTATC
AACCAAGTAC TTGGTGGAGT GAAAAGAGAA TCCAAATCAA TATCGACTGT TGAAAAGAAG
TTGAATAAAG GTACTTTAAT GACCAACAAA TTCAAGGCTT CTGCCTAA
|
|---|
| Protein sequence | MADPDNRPFT DEEWEKVKPT LVRGRGRPLG SGAKEQVTLR IDKETLDFYK SKGEGWQTFI
NQVLGGVKRE SKSISTVEKK LNKGTLMTNK FKASA
|
|---|
| |