Gene Pnec_0603 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnec_0603 
Symbol 
ID6183704 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolynucleobacter necessarius subsp. necessarius STIR1 
KingdomBacteria 
Replicon accessionNC_010531 
Strand
Start bp524008 
End bp524298 
Gene Length291 bp 
Protein Length96 aa 
Translation table11 
GC content43% 
IMG OID641671273 
Productprotein of unknown function DUF1330 
Protein accessionYP_001797469 
Protein GI171463356 
COG category[S] Function unknown 
COG ID[COG5470] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones39 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones76 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCAAAG TTATTGGGTT AATTGAGCTG AGCGATCTAA ATGCTTTTGA GCAATACCGC 
TCCCAAGTAG GTCAAACGGT TAAACTGCGT GGTGGTTCCA TCAAAAATCG AGGCTCAGTC
ACTGATGTAT TTTGGAATGA GCTCGGATGC GCACCTTTTC ACACTTTTGT AGAGCTTGAA
TTTCCAAGTG CTCAAGATGC GCAGGCTTGG GCTAGTAGCC CCGAATATCA ATCTCTTGTA
CCTGTACGCA GTAAAGCCAT GAAACTGACT TTATTTAGCA TATCTATCTA G
 
Protein sequence
MIKVIGLIEL SDLNAFEQYR SQVGQTVKLR GGSIKNRGSV TDVFWNELGC APFHTFVELE 
FPSAQDAQAW ASSPEYQSLV PVRSKAMKLT LFSISI