| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnec_0584 |
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| Symbol | |
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| ID | 6182973 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polynucleobacter necessarius subsp. necessarius STIR1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010531 |
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| Strand | - |
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| Start bp | 510447 |
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| End bp | 511595 |
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| Gene Length | 1149 bp |
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| Protein Length | 382 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 641671259 |
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| Product | protein of unknown function DUF6 transmembrane |
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| Protein accession | YP_001797455 |
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| Protein GI | 171463342 |
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| COG category | [E] Amino acid transport and metabolism
[G] Carbohydrate transport and metabolism
[R] General function prediction only |
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| COG ID | [COG0697] Permeases of the drug/metabolite transporter (DMT) superfamily |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 31 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 82 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCATTCAG CGAGCGCAGC GCATCATCAC CGACGTTACC TCTATGGCAT TCTGATGGCC
GGGGTAGGCT CTATGCTTTT CTCGGGCAAG GCAATTCTAG TAAAACTTGC CTTTGGTTAT
GGTGCAAACG CAGAGACACT TTTAGCCTTA CGCATGCTGA TGGCCCTTCC TTTATTTTGG
GGAATCTTTT GGTGGGAGTC TCGCCGCAAA GAGATGAGCC CAATTACCTG GCTTGATAGA
GGAAAACTGT TTTTTCTCGG ATTTTTAGGT TACTTCTTAT CAAGTTATAT TGATTTCCTG
GGCCTTCAGT ACATCTCCGC TGGCCTCGAG AGAATCGTTC TCTATCTGAC CCCAACAATT
GTTCTCTTAA TCTCCTATTT TGTTTTAAAG AAGCCCATCT CCCGATTGCA GTGGTATGCG
CTGGTTGTTG GTTATATCGG GGTATTCATC GTCTTTATTC AGGATGCCAG CTCTACTGGC
ATTAGCGCTT GGCTGGGGAT GTTTCTAGTG TTTGGTAGCG CCTGCTCTTA TGCAGCTTAC
ATGATTGGGG CTGGTGAGAT GGTCAAACGC ATTGGCAGCG TTCGCTTAGT TGTGTACGCT
AGCTCAGCGT CCGCCGTTTT AAGCATTGCG CAGTCAACGA TTCATAACCC ATCGGCTATC
TTCGAGCAAC TGCCACAGAT CTACTGGTAT AACTTGCTCA CCGCGAGCTT ATGTACTGTG
ATTCCCATGT TGCTGATTAT GATTGCCATC AATCGCATTG GCTCACCGCT AGTAGCACAA
GCAGGAATAC TTGGCCCAGT GTCTACTATC TTTATGGGCT ATTTAATTTT GGCCGAACCA
ATCACTTGGA CACAAATTAG CGGCATGGCT TTAGTTATCG CGGCCATGTG GCTCTTGGTG
CGCAATGATG TCCCAAGAAA AAAGTCATCA GATCTTAAAA ATCTGATGAC TTCGATGGCG
CGGAGCCCCT CAATTAAGGG GGTTTGTTTA CTGAACTGCT GTGTCGGCAG CAGCTTTAGA
TTTCTTTTTA GACTTCTTCT TTGCTTTTTT TCTCGGCTTT CTTTTCTTTC TTCGCTTTCT
TCTTCACCTT CTTCCCAGCA GCTTTATCTG CTGGCGCACT GGCCATCGCG ATATTCAGAA
TGTGACTAA
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| Protein sequence | MHSASAAHHH RRYLYGILMA GVGSMLFSGK AILVKLAFGY GANAETLLAL RMLMALPLFW
GIFWWESRRK EMSPITWLDR GKLFFLGFLG YFLSSYIDFL GLQYISAGLE RIVLYLTPTI
VLLISYFVLK KPISRLQWYA LVVGYIGVFI VFIQDASSTG ISAWLGMFLV FGSACSYAAY
MIGAGEMVKR IGSVRLVVYA SSASAVLSIA QSTIHNPSAI FEQLPQIYWY NLLTASLCTV
IPMLLIMIAI NRIGSPLVAQ AGILGPVSTI FMGYLILAEP ITWTQISGMA LVIAAMWLLV
RNDVPRKKSS DLKNLMTSMA RSPSIKGVCL LNCCVGSSFR FLFRLLLCFF SRLSFLSSLS
SSPSSQQLYL LAHWPSRYSE CD
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