| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnec_0548 |
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| Symbol | |
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| ID | 6183025 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polynucleobacter necessarius subsp. necessarius STIR1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010531 |
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| Strand | - |
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| Start bp | 487560 |
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| End bp | 488819 |
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| Gene Length | 1260 bp |
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| Protein Length | 419 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 641671226 |
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| Product | glycosyl transferase family 9 |
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| Protein accession | YP_001797422 |
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| Protein GI | 171463309 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0859] ADP-heptose:LPS heptosyltransferase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.0259889 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 76 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCTATTA GCGTCAATAC TATGCGCGCC ATTGATCACT GGGTTGGCGT ACCTCTTTGT
GCAATTGTTA GCCCTGTTAT CGCCTTGCTT GATGGCGTAA AAAATATTTA CAATCGCGGA
CCAGAGACTC CAAAAAAATT ACTTTTCATT GAGCTCTCTG AAATGGGTAG CGCCATTCTG
GTAGATCCAG CAATGCGCAA TGCGGAGGCA CGTGGAGCAG AGCTGTTTTT CCTGATCTTC
AAAAGCAATC GTGCCAGCCT CACCCTACTG AATACAGTTA AGCCTGAAAA TATTTTCACA
ATTGACTCCT CTAGTTTGGG CGGCCTGATT AAAGATACAT TGCGATTTTT AGTATTGGCT
CGCAAACACC GAATTGATAC CGCCATTGAT TTGGAGCTAT TTTCACGTTT CACCGCCCTA
TTAACCGGCA TGTGTGGGGC GCGTCGCCGC GTGGGATACC ATATTTTTCA TGGTGAAGGA
TTGTGGCGTG GCTTCATGCT GACTCGCAAA GTGCATTACA ACCCGCACAT TCATATCACC
AAGAACTTTC TATCTTTGAT TCATGCCGCT TTTGCTCAAC AGATTGAAGT TCCTTTTAGC
AAGATTGAGA TTCCAGACTC TGAAGTTTGT CTTGAGCAAG CCATCATCGA TCCGAATGCC
TTAGAGAAAG TCCGTGAGCG CATTGAGAAG CTGGCTAAAG AGGCGAACAT ACTATACACC
CCAGGAAAAG ATCGGTTGAT TCTCATTAAT CCAAATGCGA GCGACCTTTT GCCGCAACGT
CGTTGGGCGC AGCAGCGTTT TTCAGAATTA ATTCAAGCCA TCCACCAGCA ATATCCCGAT
GATTTGATAC TCATTACTGG CTCACCGGCA GAATTTGCTT ATGTAGAAAA AGTACGTGCT
GTAGCTAATA TTAAAAACGC ACTGAACTTT GCTGGACAAG TAAGTTTCGC TGAATTGCCA
CCTCTGTACA CCTTGTCCGA TGTGATGGTG ACCAATGATT CTGGTCCCGG TCACTTTTCT
ACAGTAACAT CGTTGAGAAC AGTTGTTCTC TTTGGCCCGG AAACTCCTGC GCTTTATGGC
TCAGTTGGAA ATTCCATAGC CATTGCTGCT AACTTAGCTT GCTCACCTTG CGTGAGTGCC
GCCAATCACC GTAAAACACC ATGCCATGAC AACGTCTGCA TGCAAGCCAT CACAGTGCCG
CAGGTACTGG ATAAGGTAAT AAAGCAATTA AAAGCTGCTG ATCAGGCAAA GGCTCGTTAA
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| Protein sequence | MSISVNTMRA IDHWVGVPLC AIVSPVIALL DGVKNIYNRG PETPKKLLFI ELSEMGSAIL
VDPAMRNAEA RGAELFFLIF KSNRASLTLL NTVKPENIFT IDSSSLGGLI KDTLRFLVLA
RKHRIDTAID LELFSRFTAL LTGMCGARRR VGYHIFHGEG LWRGFMLTRK VHYNPHIHIT
KNFLSLIHAA FAQQIEVPFS KIEIPDSEVC LEQAIIDPNA LEKVRERIEK LAKEANILYT
PGKDRLILIN PNASDLLPQR RWAQQRFSEL IQAIHQQYPD DLILITGSPA EFAYVEKVRA
VANIKNALNF AGQVSFAELP PLYTLSDVMV TNDSGPGHFS TVTSLRTVVL FGPETPALYG
SVGNSIAIAA NLACSPCVSA ANHRKTPCHD NVCMQAITVP QVLDKVIKQL KAADQAKAR
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