| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnec_0543 |
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| Symbol | |
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| ID | 6182980 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polynucleobacter necessarius subsp. necessarius STIR1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010531 |
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| Strand | + |
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| Start bp | 484300 |
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| End bp | 485244 |
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| Gene Length | 945 bp |
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| Protein Length | 314 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 641671223 |
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| Product | Muramoyltetrapeptide carboxypeptidase |
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| Protein accession | YP_001797419 |
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| Protein GI | 171463306 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG1619] Uncharacterized proteins, homologs of microcin C7 resistance protein MccF |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 0.646372 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 77 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGAAATCCA TTTACCTGAT TGCTCCATCG GGGGCAACTT TAGATAGCAA GAGTCCTTTA
GCCGGAATTG ACTGGTTAGA GGGCAAGGGA ATTGCTGTCG CAAATAAAGA TTGCGCCCAT
CGAGTCTACG AGCGCTTTGC CGGTAGTGAT GAAGAACGTC TTGCAGAGTT AAATCGTCTT
TCTAAATTAG ATGCGCAGAC TTTGGTGATG GCGATGCGTG GTGGATATGG TCTTCATCGC
CTGCTTCCGG GGATTGAGTG GGACGCTATT GCAAAAGCAA TTCAGGGTGG TATGCAAATT
TGTGGCCACA GTGACTTCAC AGTATTTCAG TTGGGGTTGT TAGCCAAAAC AGGCGCAATT
ACATTAGCTG GCCCTATGCT CAATTATGAC TTTGGGCGAC TTGGAGATGA TGGTGCGCTG
GTAGTACCAG ATGAATTTAT GTGGGAGCAC TTCCAGGATG CAATAGACAA TCGAAGGCTG
GAATGTCAGG TAATTACTCC TCAATCCTTT TTGGGTAAAG CGAACACCCA TACTCTTAAG
GGTTTATTGT GGGGCGGCAA TTTAACGGTA TTAGCTGGCT TGGTTGGAAC ACCATACCTT
CCGAGCGCCA AGCAAACTCA AGGCGGCATC TTATTTTTGG AGGATGTGAA TGAGCATCCC
TACCGAATTG AGAGAATGCT GATGCAGATC CTAGATGCGG GAGTGCTTTC GAATCAGGCC
GCTATTTTGT TAGGGGGATT TTCTGTATAT TGCTTATACG ATAACGATAA GGGCTACTCT
CTGGAGCGAG CAATTGAAGC AATTCGTAAG CGTTTATCTG ACGACACTCC TATTTTGACC
GGCCTTCCAT TTGGCCATCA GTCAAATAAA TTAACCATGC CTGTTGGTGC CGCGGTAAGC
TTAAATTTCA ATGTAGATGG ATTTGAGCTT AAAGCACGGT GGTAA
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| Protein sequence | MKSIYLIAPS GATLDSKSPL AGIDWLEGKG IAVANKDCAH RVYERFAGSD EERLAELNRL
SKLDAQTLVM AMRGGYGLHR LLPGIEWDAI AKAIQGGMQI CGHSDFTVFQ LGLLAKTGAI
TLAGPMLNYD FGRLGDDGAL VVPDEFMWEH FQDAIDNRRL ECQVITPQSF LGKANTHTLK
GLLWGGNLTV LAGLVGTPYL PSAKQTQGGI LFLEDVNEHP YRIERMLMQI LDAGVLSNQA
AILLGGFSVY CLYDNDKGYS LERAIEAIRK RLSDDTPILT GLPFGHQSNK LTMPVGAAVS
LNFNVDGFEL KARW
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