Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pnec_0504 |
Symbol | |
ID | 6184253 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Polynucleobacter necessarius subsp. necessarius STIR1 |
Kingdom | Bacteria |
Replicon accession | NC_010531 |
Strand | + |
Start bp | 454051 |
End bp | 454542 |
Gene Length | 492 bp |
Protein Length | 163 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 641671186 |
Product | NUDIX hydrolase |
Protein accession | YP_001797382 |
Protein GI | 171463269 |
COG category | [F] Nucleotide transport and metabolism |
COG ID | [COG1051] ADP-ribose pyrophosphatase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 0.316146 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 70 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAATGCAC TTGCAGCAAT TGCTACTCAG GCAAAAAATT CTCCATATTC AGATCAATGC AAATTGGTAT TGGCATCTGC AGATCCTTAT GCACGCGCAT CTAAAGCGGG GCACATCACC GCGAGTGGCT TAGTTATTCG TGACGATAAG GTTTTGCTTA TATTCCATCC TTTTATAAAG CGCTGGTTCC AGCCAGGCGG CCATATTGAC GAAGGTGAAT CTTCGATTGA GGCTGCAATT AGAGAGGTTT ATGAAGAAAC CGGCTACGTC TGTGAGCTGG ACTCCAATAA CCAAGAGCCG ATTGATATTG ATATTCACGA GACCCCCGAA AATCCCAAAA AGGGCGAGGG CGCTCATTTA CACATTGATT TACTTTATTG CTTGCGAGTC GTGCGACAAG AACAATCGGA GGAAGATATT GAATGTAAAT GGTTTGCTTT CAATGAAATC GAAAGCATTC GAATCCAGCG CGCCTTGGCT AAACTCGCTT AA
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Protein sequence | MNALAAIATQ AKNSPYSDQC KLVLASADPY ARASKAGHIT ASGLVIRDDK VLLIFHPFIK RWFQPGGHID EGESSIEAAI REVYEETGYV CELDSNNQEP IDIDIHETPE NPKKGEGAHL HIDLLYCLRV VRQEQSEEDI ECKWFAFNEI ESIRIQRALA KLA
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