Gene Pnec_0504 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnec_0504 
Symbol 
ID6184253 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolynucleobacter necessarius subsp. necessarius STIR1 
KingdomBacteria 
Replicon accessionNC_010531 
Strand
Start bp454051 
End bp454542 
Gene Length492 bp 
Protein Length163 aa 
Translation table11 
GC content44% 
IMG OID641671186 
ProductNUDIX hydrolase 
Protein accessionYP_001797382 
Protein GI171463269 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG1051] ADP-ribose pyrophosphatase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value0.316146 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones70 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATGCAC TTGCAGCAAT TGCTACTCAG GCAAAAAATT CTCCATATTC AGATCAATGC 
AAATTGGTAT TGGCATCTGC AGATCCTTAT GCACGCGCAT CTAAAGCGGG GCACATCACC
GCGAGTGGCT TAGTTATTCG TGACGATAAG GTTTTGCTTA TATTCCATCC TTTTATAAAG
CGCTGGTTCC AGCCAGGCGG CCATATTGAC GAAGGTGAAT CTTCGATTGA GGCTGCAATT
AGAGAGGTTT ATGAAGAAAC CGGCTACGTC TGTGAGCTGG ACTCCAATAA CCAAGAGCCG
ATTGATATTG ATATTCACGA GACCCCCGAA AATCCCAAAA AGGGCGAGGG CGCTCATTTA
CACATTGATT TACTTTATTG CTTGCGAGTC GTGCGACAAG AACAATCGGA GGAAGATATT
GAATGTAAAT GGTTTGCTTT CAATGAAATC GAAAGCATTC GAATCCAGCG CGCCTTGGCT
AAACTCGCTT AA
 
Protein sequence
MNALAAIATQ AKNSPYSDQC KLVLASADPY ARASKAGHIT ASGLVIRDDK VLLIFHPFIK 
RWFQPGGHID EGESSIEAAI REVYEETGYV CELDSNNQEP IDIDIHETPE NPKKGEGAHL
HIDLLYCLRV VRQEQSEEDI ECKWFAFNEI ESIRIQRALA KLA