Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pnec_0497 |
Symbol | |
ID | 6184572 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Polynucleobacter necessarius subsp. necessarius STIR1 |
Kingdom | Bacteria |
Replicon accession | NC_010531 |
Strand | + |
Start bp | 442974 |
End bp | 444242 |
Gene Length | 1269 bp |
Protein Length | 422 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 641671179 |
Product | DNA repair protein RadA |
Protein accession | YP_001797375 |
Protein GI | 171463262 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG1066] Predicted ATP-dependent serine protease |
TIGRFAM ID | [TIGR00416] DNA repair protein RadA |
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Plasmid Coverage information |
Num covering plasmid clones | 29 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 76 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGAAGAAG GTCTTCTGGA AACAACTTCC AATTCTCGTT TTCAGGGTTT GGCGCAATCG TTGCCAAGAC AAAAGCTCTC TGCTATTGCT GCGGAAGATT TACCAAGGTT TAGTACGGGT GTAGAGGAGT TTGATCGCGT GCTGGGTGGT GGCTTAGTTC CGGGCGGAGC AGTGCTCTTA GGTGGTGACC CCGGTATTGG TAAATCAACT TTGCTATTGC AAGCACTTGC AGAGATGAGT GCTGCCGGGA TGAATGTGCT TTATAGCAGC GGCGAAGAAT CGGCTGCCCA GATTGCATTG CGTGCGAAGC GCATTGCATT AGATGCCCCC CAACTAGAAG TGTTGGCTGA AATTCGGTTA GAGAAACTGA TTTCAATTAT GGACACCGTT AAGCCACAAG TATTAGTGGT GGATTCCATT CAGACCTTGT ATTCAGAGGT TTTAAGTTCA GCCCCAGGCT CTGTTGCTCA AGTACGCGAG TGCGCTGCGC AATTAACGAG AGCTGCTAAA TCAAGTGGCA TCTGCGTGCT GATGGTAGGG CATGTGACCA AGGATGGTCA TCTGGCTGGT CCTAGAGTGT TAGAGCATAT TGTTGATACC GTTTTGTATT TCGAAGGCGA TACCCATTCT TCTTTCCGCT TAGTGCGATC CATCAAGAAT CGCTTTGGCG CTGTCAATGA GCTTGGTGTA TTCGCTATGA CAGAAAAAGG TTTGCGGGGA GTAACCAACC CTTCGGCGAT TTTCTTGTCG CAACACGAAC AAATGGTTCC TGGTGCCTGT GTATTGGTTA CGCAAGAAGG CAGCAGACCT TTGTTGGTGG AGATTCAGGC TCTGGTGGAT ACCGCGCATG TGCCCAATCC TCGCCGCTTA GCAGTTGGCT TGGAACAAGC TCGTTTGGCA ATGCTCTTGG CGGTGTTGCA TCGTCACGCT GGTGTTGCCT GTTTTGATCA AGATGTTTTC TTAAATGCAG TTGGTGGCGT AAAGATATCC GAGCCGGCTG CTGACTTAGC TATATTGCTC GCCATTCAAT CTTCTATTCG GAATCGCGCC TTGCCTAAAG AGTTAATCGT ATTTGGTGAA GTTGGTTTGG CTGGAGAGAT TCGTCCTTGT CCACGCGGTC AGGAGCGCTT GAAAGAAGCT GTTAAATTGG GCTTTACTCT AGCCATCATT CCAAAAGCCA ATATGCCTAA GACTAAGATT CCAGGGGTGA AGGTAATTCC AGTGGAGCGA ATTGATCAGG CAATCGCGGC GGCTGCAGAG TTAAGTTAA
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Protein sequence | MEEGLLETTS NSRFQGLAQS LPRQKLSAIA AEDLPRFSTG VEEFDRVLGG GLVPGGAVLL GGDPGIGKST LLLQALAEMS AAGMNVLYSS GEESAAQIAL RAKRIALDAP QLEVLAEIRL EKLISIMDTV KPQVLVVDSI QTLYSEVLSS APGSVAQVRE CAAQLTRAAK SSGICVLMVG HVTKDGHLAG PRVLEHIVDT VLYFEGDTHS SFRLVRSIKN RFGAVNELGV FAMTEKGLRG VTNPSAIFLS QHEQMVPGAC VLVTQEGSRP LLVEIQALVD TAHVPNPRRL AVGLEQARLA MLLAVLHRHA GVACFDQDVF LNAVGGVKIS EPAADLAILL AIQSSIRNRA LPKELIVFGE VGLAGEIRPC PRGQERLKEA VKLGFTLAII PKANMPKTKI PGVKVIPVER IDQAIAAAAE LS
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