Gene Pnec_0480 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnec_0480 
Symbol 
ID6184393 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolynucleobacter necessarius subsp. necessarius STIR1 
KingdomBacteria 
Replicon accessionNC_010531 
Strand- 
Start bp425875 
End bp426234 
Gene Length360 bp 
Protein Length119 aa 
Translation table11 
GC content43% 
IMG OID641671163 
Productprotein of unknown function DUF81 
Protein accessionYP_001797360 
Protein GI171463247 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value0.441073 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones82 
Fosmid unclonability p-value1 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTGCAAT TTTTTCAAGA TTCTTCCCAA TTTATTATTT CTGGCGCCTT GGTTGGACTA 
TTAGTAGGAA TAACTGGGGT TGGCGGAGGC TCATTAATGA CTCCTTTACT AACCATTATT 
TTTGGCGTTG CCCCAACCAC AGCGGTTGGA ACCGATCTCG CTTTTGCTGC GATCACAAAA 
GGCTTTGGCA CTGCCGCACA CCGATTACAT GGAAATGTTC ACTGGGACAT AGTCAGATTA 
CTTTGCATAG GTAGCTTAAC TACCGCCATC GCTTCCATCT TGGCATTGAA ATATGTAGGC 
CCAGTCTCAA AAGACTTTAA TCACCTCATT AGTTTTCCAT TGGAGTTTCA GTGCTATTAA
 
Protein sequence
MLQFFQDSSQ FIISGALVGL LVGITGVGGG SLMTPLLTII FGVAPTTAVG TDLAFAAITK 
GFGTAAHRLH GNVHWDIVRL LCIGSLTTAI ASILALKYVG PVSKDFNHLI SFPLEFQCY